RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 PTPN9P43378 593 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 TAF10Q12962 218 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 BHLHA9Q7RTU4 235 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 DNAJB7Q7Z6W7 309 aaPredicted RBP23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 RBM23Q86U06 439 aaKnown RBP23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 DEFB106AQ8N104 65 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 SLC35F6Q8N357 371 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 MYLIPQ8WY64 445 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 NDRG1Q92597 394 aaKnown RBP23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 BTBD6Q96KE9 485 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 DDX23Q9BUQ8 820 aaKnown RBP23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 CLIC5Q9NZA1 410 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 AMFRQ9UKV5 643 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 HCFC2Q9Y5Z7 792 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 ATG2AQ2TAZ0 1938 aa23.34■■□□□ 1.33
PAXBP1-208ENST00000472588 TMEM110-MUSTN1A8MSY1 372 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 PER2O15055 1255 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 HNRNPA1P09651 372 aaKnown RBP eCLIP23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 NCAM1P13591 858 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 TNNT1P13805 278 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 MTMR3Q13615 1198 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 DCAF6Q58WW2 860 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 CDK5RAP1Q96SZ6 601 aaKnown RBP23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 TRIM7Q9C029 511 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 NSUN3Q9H649 340 aaKnown RBP23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 ZDHHC7Q9NXF8 308 aa23.33■■□□□ 1.33
PAXBP1-208ENST00000472588 TRANK1O15050 2925 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 SPDYE4A6NLX3 237 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 RFXAPO00287 272 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 SPOPO43791 374 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 RALAP11233 206 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 HMGA1P17096 107 aaKnown RBP23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 CASQ1P31415 396 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 NRIP1P48552 1158 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 SLC25A52Q3SY17 297 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 PABPC1LQ4VXU2 614 aaKnown RBP23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 ADGRD2Q7Z7M1 963 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 RNF139Q8WU17 664 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 DNAI1Q9UI46 699 aa23.33■■□□□ 1.32
PAXBP1-208ENST00000472588 CTAGE9A4FU28 777 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 XYLBO75191 536 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 SRGAP2BP0DMP2 458 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 EPCAMP16422 314 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 COMTP21964 271 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 OGDHQ02218 1023 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 CCDC14Q49A88 953 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 SYT10Q6XYQ8 523 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 HFE2Q6ZVN8 426 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 TADA2BQ86TJ2 420 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 STKLD1Q8NE28 680 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 CFAP57Q96MR6 1250 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 OLA1Q9NTK5 396 aaKnown RBP23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 TRPM5Q9NZQ8 1165 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 GMIPQ9P107 970 aa23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.32■■□□□ 1.32
PAXBP1-208ENST00000472588 A0A1W2PQH9 124 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 MIF4GDA9UHW6 222 aaKnown RBP23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 FGF19O95750 216 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 F9P00740 461 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 POU2F2P09086 479 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 ZDHHC11BP0C7U3 371 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 ZNF252P-AS1Q0IIN9 211 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 HADHQ16836 314 aaKnown RBP23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 MEI1Q5TIA1 1274 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 SNX30Q5VWJ9 437 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 STRADAQ7RTN6 431 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 SCD5Q86SK9 330 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 NT5DC3Q86UY8 548 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 ZNF276Q8N554 614 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 CASP10Q92851 521 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 NT5C3BQ969T7 300 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 WDR24Q96S15 920 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 NAPGQ99747 312 aaPredicted RBP23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 NAALADL1Q9UQQ1 740 aa23.31■■□□□ 1.32
PAXBP1-208ENST00000472588 FTCDO95954 541 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 FYNP06241 537 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 GBP1P32455 592 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 PCK1P35558 622 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 DNTTIP2Q5QJE6 756 aaKnown RBP23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 CC2D1AQ6P1N0 951 aaPredicted RBP23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 RSRC2Q7L4I2 434 aaKnown RBP23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 LEMD2Q8NC56 503 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 KIF18AQ8NI77 898 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 EDEM1Q92611 657 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 CENPIQ92674 756 aaPredicted RBP23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 NPY6RQ99463 290 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 GAS2L1Q99501 681 aaPredicted RBP23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 DZANK1Q9NVP4 752 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 USTQ9Y2C2 406 aa23.3■■□□□ 1.32
PAXBP1-208ENST00000472588 CCDC66A2RUB6 948 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 SULT1E1P49888 294 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 ATP11AP98196 1134 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 RPS6KA1Q15418 735 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 SYPL2Q5VXT5 272 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 TRNP1Q6NT89 227 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 UBL4BQ8N7F7 174 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 FAM172AQ8WUF8 416 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 PGAP3Q96FM1 320 aaPredicted RBP23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 GOLPH3Q9H4A6 298 aa23.29■■□□□ 1.32
PAXBP1-208ENST00000472588 NMUR1Q9HB89 426 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms