RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 TRMT10CQ7L0Y3 403 aaKnown RBP12.69□□□□□ -0.38
IRF1-208ENST00000472045 CACUL1Q86Y37 369 aa12.69□□□□□ -0.38
IRF1-208ENST00000472045 PHACTR4Q8IZ21 702 aa12.69□□□□□ -0.38
IRF1-208ENST00000472045 LZICQ8WZA0 190 aa12.69□□□□□ -0.38
IRF1-208ENST00000472045 C18orf25Q96B23 403 aaPredicted RBP12.69□□□□□ -0.38
IRF1-208ENST00000472045 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
IRF1-208ENST00000472045 NUDT5Q9UKK9 219 aa12.69□□□□□ -0.38
IRF1-208ENST00000472045 PHF20L1A8MW92 1017 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 SRP72O76094 671 aaKnown RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 LYPLA2O95372 231 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 TGM2P21980 687 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 COILP38432 576 aaPredicted RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 DDX42Q86XP3 938 aaKnown RBP eCLIP12.68□□□□□ -0.38
IRF1-208ENST00000472045 MCOLN2Q8IZK6 566 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 RBM22Q9NW64 420 aaKnown RBP eCLIP12.68□□□□□ -0.38
IRF1-208ENST00000472045 DNMT3LQ9UJW3 386 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 SLC39A10Q9ULF5 831 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 CAPN7Q9Y6W3 813 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 OR6C75A6NL08 312 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 ICAM3P32942 547 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 TNFSF9P41273 254 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 MCL1Q07820 350 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 NFIL3Q16649 462 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 ZNF571Q7Z3V5 609 aaPredicted RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 AGR3Q8TD06 166 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 FICDQ9BVA6 458 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 PCDHA2Q9Y5H9 948 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 BAZ2BQ9UIF8 2168 aaKnown RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 CCNE2O96020 404 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 SERPINF2P08697 491 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 NPR3P17342 541 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 PBLDP30039 288 aaPredicted RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 ITGA8P53708 1063 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 OTUD4Q01804 1114 aaKnown RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 TRADDQ15628 312 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 SPDYE7PQ495Y7 208 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 CDKAL1Q5VV42 579 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 SPOCD1Q6ZMY3 1216 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 TACO1Q9BSH4 297 aaKnown RBP12.68□□□□□ -0.38
IRF1-208ENST00000472045 OSGEPL1Q9H4B0 414 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 DCTN3O75935 186 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 LPCAT1Q8NF37 534 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 TRABDQ9H4I3 376 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 ITM2BQ9Y287 266 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
IRF1-208ENST00000472045 TARSL2A2RTX5 802 aaKnown RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 PSEN1P49768 467 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 CCL14Q16627 93 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 HIST2H2ACQ16777 129 aaPredicted RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 E4F1Q66K89 784 aaPredicted RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 HIST2H2AA3Q6FI13 130 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 LZTR1Q8N653 840 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 CASZ1Q86V15 1759 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 E5RJQ4 531 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 KPNA3O00505 521 aaPredicted RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 OR1D2P34982 312 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 CARSP49589 748 aaKnown RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 TAF11Q15544 211 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 C3orf62Q6ZUJ4 267 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 CLPBQ9H078 707 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 PSMC3IPQ9P2W1 217 aaPredicted RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 LGR5O75473 907 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ADRB2P07550 413 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
IRF1-208ENST00000472045 MAP2K2P36507 400 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 MAGEA4P43358 317 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 E2F4Q16254 413 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ANKRD20A4Q4UJ75 823 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 ANKRD20A8PQ5CZ79 823 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 RASAL3Q86YV0 1011 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ADAM33Q9BZ11 813 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 RBM12Q9NTZ6 932 aaKnown RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 TBC1D13Q9NVG8 400 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 RAB23Q9ULC3 237 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ATRNL1Q5VV63 1379 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 SYNDIG1LA6NDD5 238 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 SPECC1L-ADORA2AF8WAN1 911 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 CAND2O75155 1236 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 FNTAP49354 379 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 CASP5P51878 434 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 PTK7Q13308 1070 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 EFTUD2Q15029 972 aaKnown RBP eCLIP12.67□□□□□ -0.383e-6■■■■□ 21.3
IRF1-208ENST00000472045 SH3D19Q5HYK7 790 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms