RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ARFGAP1Q8N6T3 406 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 LINC01465Q8N7H1 131 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 ADAMTS15Q8TE58 950 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 MAML1Q92585 1016 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 TRIM43Q96BQ3 446 aaPredicted RBP4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 NMD3Q96D46 503 aaKnown RBP4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 GPATCH3Q96I76 525 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 ZNF668Q96K58 619 aaPredicted RBP4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 ZCWPW1Q9H0M4 648 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 DHX36Q9H2U1 1008 aaKnown RBP4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 ZIM2Q9NZV7 527 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 HEY2Q9UBP5 337 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 STEAP1Q9UHE8 339 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 AQP7P3A6NL99 342 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 FYB1O15117 783 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 RRP9O43818 475 aaKnown RBP4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 USP12O75317 370 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 TULP3O75386 442 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 INMTO95050 263 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 ALPLP05186 524 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 ATF7P17544 494 aaPredicted RBP4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 CPT1AP50416 773 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 EPHB1P54762 984 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 CNN3Q15417 329 aaKnown RBP4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 NPY5RQ15761 445 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 CNGA2Q16280 664 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 ST3GAL2Q16842 350 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 LEXMQ3ZCV2 418 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 KIAA1161Q6NSJ0 714 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 C11orf44Q8N8P7 122 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 IPCEF1Q8WWN9 437 aaPredicted RBP4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 ZFYVE19Q96K21 471 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 MARK4Q96L34 752 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 HIST1H2AAQ96QV6 131 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 ADGRE3Q9BY15 652 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 RTFDC1Q9BY42 306 aaPredicted RBP4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 CDH19Q9H159 772 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 TMEM60Q9H2L4 133 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM83DQ9H4H8 585 aa4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 AFF4Q9UHB7 1163 aaKnown RBP4.15□□□□□ -1.75
PRPF40A-207ENST00000471701 A8MVJ9 347 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 PARP1P09874 1014 aaKnown RBP4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 PSG1P11464 419 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 ADRA1DP25100 572 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 TXNL4AP83876 142 aaKnown RBP4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 SLC14A1Q13336 389 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 SEC23BQ15437 767 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 MINDY4Q4G0A6 757 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 C3orf38Q5JPI3 329 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 LVRNQ6Q4G3 990 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 CLEC9AQ6UXN8 241 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 COLCA1Q6ZS62 124 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 COL23A1Q86Y22 540 aaPredicted RBP4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 PNPLA1Q8N8W4 532 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 EDC3Q96F86 508 aaKnown RBP4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 HIC2Q96JB3 615 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 LYZL4Q96KX0 146 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 CINPQ9BW66 212 aaPredicted RBP4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 C22orf23Q9BZE7 217 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM204AQ9H8W3 233 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 ARL8BQ9NVJ2 186 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 ITGB1BP2Q9UKP3 347 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 OGDHLQ9ULD0 1010 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 L1RE1Q9UN81 338 aa4.14□□□□□ -1.75
PRPF40A-207ENST00000471701 CCDC187A0A096LP49 1063 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 B4DGG1 531 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM227AF5H4B4 570 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 PRPF3O43395 683 aaKnown RBP4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 BTF3P20290 206 aaKnown RBP4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 ACVR2AP27037 513 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 CACNB3P54284 484 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 FMO1Q01740 532 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 CFHR1Q03591 330 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 DEUP1Q05D60 604 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 SEMA3AQ14563 771 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 EARS2Q5JPH6 523 aaKnown RBP4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 DAB2IPQ5VWQ8 1189 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 CXorf57Q6NSI4 855 aaKnown RBP4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 MZT2AQ6P582 158 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 PIP4P1Q86T03 277 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 KIAA0319LQ8IZA0 1049 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 ZNF548Q8NEK5 533 aaPredicted RBP4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 LRRC27Q9C0I9 530 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 NUAK2Q9H093 628 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM234AQ9H0X4 552 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 CHST8Q9H2A9 424 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 ZNF287Q9HBT7 754 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 C1orf112Q9NSG2 853 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 STK32BQ9NY57 414 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 ASAP1Q9ULH1 1129 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 FZD4Q9ULV1 537 aa4.13□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM90A8PA6NJQ4 464 aa4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 INPPL1O15357 1258 aa4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 FRS3O43559 492 aa4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 CNOT3O75175 753 aaKnown RBP4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 MAP4K4O95819 1239 aaPredicted RBP4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM90A13PP0C7W8 464 aa4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 FAM90A24PP0C7X0 464 aa4.12□□□□□ -1.75
PRPF40A-207ENST00000471701 TXNP10599 105 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms