RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 COL4A2P08572 1712 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 LEFTY2O00292 366 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 MDM4O15151 490 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 GYPCP04921 128 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 ATP5C1P36542 298 aaKnown RBP26.41■■□□□ 1.82
COL15A1-203ENST00000471477 NOMO3P69849 1222 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 BSPRYQ5W0U4 402 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 ZNF276Q8N554 614 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 ZFRQ96KR1 1074 aaKnown RBP26.41■■□□□ 1.82
COL15A1-203ENST00000471477 TRIM5Q9C035 493 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 BRD9Q9H8M2 597 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 SLC2A4RGQ9NR83 387 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 AIPL1Q9NZN9 384 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 CAPN11Q9UMQ6 739 aa26.41■■□□□ 1.82
COL15A1-203ENST00000471477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.41■■□□□ 1.82
COL15A1-203ENST00000471477 ERBB2P04626 1255 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 TCF3P15923 654 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 MTF1Q14872 753 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 NAA35Q5VZE5 725 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 SPECC1LQ69YQ0 1117 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 KLHDC10Q6PID8 442 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 RSRC2Q7L4I2 434 aaKnown RBP26.4■■□□□ 1.82
COL15A1-203ENST00000471477 TADA2BQ86TJ2 420 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 VSTM4Q8IW00 320 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 IPO4Q8TEX9 1081 aaKnown RBP26.4■■□□□ 1.82
COL15A1-203ENST00000471477 EDEM1Q92611 657 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 ZFYVE19Q96K21 471 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 CDK5RAP1Q96SZ6 601 aaKnown RBP26.4■■□□□ 1.82
COL15A1-203ENST00000471477 EPHX3Q9H6B9 360 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 SYNCQ9H7C4 482 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 TECTAO75443 2155 aa26.4■■□□□ 1.82
COL15A1-203ENST00000471477 ZNF263O14978 683 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 SART1O43290 800 aaKnown RBP26.39■■□□□ 1.82
COL15A1-203ENST00000471477 LTFP02788 710 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 CYP1A1P04798 512 aaPredicted RBP26.39■■□□□ 1.82
COL15A1-203ENST00000471477 TRIM72Q6ZMU5 477 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 ZNF397Q8NF99 534 aaPredicted RBP26.39■■□□□ 1.82
COL15A1-203ENST00000471477 CPA5Q8WXQ8 436 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 PCDHB18PQ96TA0 734 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 AGPAT1Q99943 283 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 C1QTNF1Q9BXJ1 281 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 ABCC13Q9NSE7 274 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 SEPT11Q9NVA2 429 aaKnown RBP26.39■■□□□ 1.82
COL15A1-203ENST00000471477 DNMT3LQ9UJW3 386 aa26.39■■□□□ 1.82
COL15A1-203ENST00000471477 CHADO15335 359 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 ZBED6P86452 979 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 SIGLEC14Q08ET2 396 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 EFEMP1Q12805 493 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 ARHGAP29Q52LW3 1261 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 FAM183BPQ6ZVS7 135 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 GOLGA1Q92805 767 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 FAM149B1Q96BN6 582 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 ASIC4Q96FT7 647 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 PIWIL1Q96J94 861 aaKnown RBP26.39■■□□□ 1.81
COL15A1-203ENST00000471477 GKN1Q9NS71 199 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 THG1LQ9NWX6 298 aaKnown RBP26.39■■□□□ 1.81
COL15A1-203ENST00000471477 CFAP97Q9P2B7 532 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 RASAL2Q9UJF2 1139 aa26.39■■□□□ 1.81
COL15A1-203ENST00000471477 LUC7L2Q9Y383 392 aaKnown RBP26.39■■□□□ 1.81
COL15A1-203ENST00000471477 CASP14P31944 242 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 SNX16P57768 344 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 OR6B2Q6IFH4 312 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 CC2D1AQ6P1N0 951 aaPredicted RBP26.38■■□□□ 1.81
COL15A1-203ENST00000471477 ERICH1Q86X53 443 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 DDX42Q86XP3 938 aaKnown RBP eCLIP26.38■■□□□ 1.81
COL15A1-203ENST00000471477 MIB1Q86YT6 1006 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 RNF139Q8WU17 664 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 IRF7Q92985 503 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 KLF16Q9BXK1 252 aaPredicted RBP26.38■■□□□ 1.81
COL15A1-203ENST00000471477 NUCKS1Q9H1E3 243 aaKnown RBP26.38■■□□□ 1.81
COL15A1-203ENST00000471477 FBXL21Q9UKT6 434 aa26.38■■□□□ 1.81
COL15A1-203ENST00000471477 IRF1P10914 325 aa26.37■■□□□ 1.81
COL15A1-203ENST00000471477 PRKCIP41743 596 aa26.37■■□□□ 1.81
COL15A1-203ENST00000471477 PFKPQ01813 784 aa26.37■■□□□ 1.81
COL15A1-203ENST00000471477 SYT11Q9BT88 431 aa26.37■■□□□ 1.81
COL15A1-203ENST00000471477 HAUS4Q9H6D7 363 aa26.37■■□□□ 1.81
COL15A1-203ENST00000471477 OLA1Q9NTK5 396 aaKnown RBP26.37■■□□□ 1.81
COL15A1-203ENST00000471477 ARNTLO00327 626 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 SCAMP3O14828 347 aaKnown RBP26.36■■□□□ 1.81
COL15A1-203ENST00000471477 UNGP13051 313 aaPredicted RBP26.36■■□□□ 1.81
COL15A1-203ENST00000471477 GABRB2P47870 512 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 KLHL30Q0D2K2 578 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 TRIM14Q14142 442 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 CLEC16AQ2KHT3 1053 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 C2CD6Q53TS8 623 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 IER5LQ5T953 404 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 TRIM68Q6AZZ1 485 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 OLFML1Q6UWY5 402 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 TRIM67Q6ZTA4 783 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 MSANTD4Q8NCY6 345 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 OLIG1Q8TAK6 271 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 DNASE1L2Q92874 299 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 WBP2Q969T9 261 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 C18orf8Q96DM3 657 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 MARCH2Q9P0N8 246 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 CA14Q9ULX7 337 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 WNT6Q9Y6F9 365 aa26.36■■□□□ 1.81
COL15A1-203ENST00000471477 COL4A3Q01955 1670 aa26.35■■□□□ 1.81
COL15A1-203ENST00000471477 FYNP06241 537 aa26.35■■□□□ 1.81
COL15A1-203ENST00000471477 SKILP12757 684 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms