RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TUBP50607 506 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
CPSF4-211ENST00000471455 AMPD3Q01432 767 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 KDSRQ06136 332 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 GFPT1Q06210 699 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-211ENST00000471455 TAF10Q12962 218 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 TRPC3Q13507 836 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 CCDC142Q17RM4 750 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 DUOXA1Q1HG43 343 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 SDE2Q6IQ49 451 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 SLC23A3Q6PIS1 610 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 ARMCX6Q7L4S7 300 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 ADGRG2Q8IZP9 1017 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 ASCC3Q8N3C0 2202 aaKnown RBP9.69□□□□□ -0.86
CPSF4-211ENST00000471455 IL17RCQ8NAC3 791 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 OR6B3Q8NGW1 331 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 DUSP9Q99956 384 aaKnown RBP9.69□□□□□ -0.86
CPSF4-211ENST00000471455 SCNM1Q9BWG6 230 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 TNMDQ9H2S6 317 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 HSPBP1Q9NZL4 362 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 DEC1Q9P2X7 70 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 SLC6A14Q9UN76 642 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
CPSF4-211ENST00000471455 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-211ENST00000471455 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 UBE4BO95155 1302 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 A0A0A0MRY4 1105 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 SGK1O00141 431 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 EIF3DO15371 548 aaKnown RBP eCLIP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 HOXC11O43248 304 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 HCRTO43612 131 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 OPHN1O60890 802 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 ZNF217O75362 1048 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 SYPP08247 313 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 DLATP10515 647 aaKnown RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 PTPN1P18031 435 aaKnown RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 TNNI1P19237 187 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 KIR2DL1P43626 348 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 SIM1P81133 766 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 RPL6Q02878 288 aaKnown RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 GOLGA8FQ08AF8 430 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 GOLGA8DPQ0D2H9 430 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 IFRD2Q12894 506 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 SNRNP35Q16560 246 aaKnown RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 GAB4Q2WGN9 574 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 MAP7D1Q3KQU3 841 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 HECTD3Q5T447 861 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 PEAR1Q5VY43 1037 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 RHBDF2Q6PJF5 856 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 USP49Q70CQ1 688 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 TRAPPC11Q7Z392 1133 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 CBWD2Q8IUF1 395 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 TMEFF1Q8IYR6 380 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 ZNF513Q8N8E2 541 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 ZSWIM2Q8NEG5 633 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 OR5B17Q8NGF7 314 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 RLN3Q8WXF3 142 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 GATA6Q92908 595 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 FBXO32Q969P5 355 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 SYAP1Q96A49 352 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-211ENST00000471455 TNIP3Q96KP6 325 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 CGRRF1Q99675 332 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 CUEDC2Q9H467 287 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 COMMD8Q9NX08 183 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 SUSD2Q9UGT4 822 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 PILRBQ9UKJ0 227 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 WASF3Q9UPY6 502 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 CLIC4Q9Y696 253 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 CACNA1EQ15878 2313 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 GON4LQ3T8J9 2241 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 PTPRDP23468 1912 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 PLXND1Q9Y4D7 1925 aa9.68□□□□□ -0.86
CPSF4-211ENST00000471455 CFAP47Q6ZTR5 3102 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 PI4KAP42356 2102 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 PTPRJQ12913 1337 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 BAHCC1Q9P281 2608 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 A8MXQ7 604 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 CAPN5O15484 640 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 SERPINF2P08697 491 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 HOXB2P14652 356 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ATICP31939 592 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 PTGER3P43115 390 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 SLC6A11P48066 632 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 WDR4P57081 412 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ZXDBP98169 803 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 PSMD6Q15008 389 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ZNF423Q2M1K9 1284 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ANO4Q32M45 955 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 WDR72Q3MJ13 1102 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 LY6G5CQ5SRR4 150 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 C10orf76Q5T2E6 689 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 GRAMD4Q6IC98 578 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 KIAA1211LQ6NV74 962 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 TERB1Q8NA31 727 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms