RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 CNGA2Q16280 664 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 ITPRIPL2Q3MIP1 535 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 RAB41Q5JT25 222 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 GJB7Q6PEY0 223 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 LCLAT1Q6UWP7 414 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 ZNF852Q6ZMS4 543 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 DDX42Q86XP3 938 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM59-204ENST00000471396 CCDC105Q8IYK2 499 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 KIAA1958Q8N8K9 716 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 TFAP2BQ92481 460 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 SHC3Q92529 594 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 NELL2Q99435 816 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 OSBPL6Q9BZF3 934 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 NACA2Q9H009 215 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 CCSER2Q9H7U1 834 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 LRRC4Q9HBW1 653 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 SIX2Q9NPC8 291 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 HPS4Q9NQG7 708 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 GKN1Q9NS71 199 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 SMPD4Q9NXE4 827 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 TAB2Q9NYJ8 693 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 GTSE1Q9NYZ3 720 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 CHORDC1Q9UHD1 332 aaPredicted RBP8.07□□□□□ -1.12
TRIM59-204ENST00000471396 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM59-204ENST00000471396 SIT1Q9Y3P8 196 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 WNT6Q9Y6F9 365 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
TRIM59-204ENST00000471396 A0A1W2PQH9 124 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 FAM170BA6NMN3 283 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 SPECC1L-ADORA2AF8WAN1 911 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 PES1O00541 588 aaKnown RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 DCNP07585 359 aaKnown RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 TPM2P07951 284 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 RALAP11233 206 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ARSAP15289 507 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 CD72P21854 359 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 MAGEA9P43362 315 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 SOX9P48436 509 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 PGFP49763 221 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 PTPN5P54829 565 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ZXDBP98169 803 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 APBA1Q02410 837 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 KRT31Q15323 416 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 MEA1Q16626 185 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ARHGAP44Q17R89 818 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 KLHL40Q2TBA0 621 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 TRIM68Q6AZZ1 485 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 KLHDC10Q6PID8 442 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 SCD5Q86SK9 330 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 TADA2BQ86TJ2 420 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 RALGPS2Q86X27 583 aaPredicted RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ARHGAP18Q8N392 663 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 CPA6Q8N4T0 437 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 DTWD2Q8NBA8 298 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 TTC16Q8NEE8 873 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ANKRD20A12PQ8NF67 263 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 PRSS33Q8NF86 280 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 UBA3Q8TBC4 463 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 OSCP1Q8WVF1 389 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 KCTD13Q8WZ19 329 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 FAM3CQ92520 227 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 SECISBP2LQ93073 1101 aaKnown RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ATP2A3Q93084 1043 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 PRR14Q9BWN1 585 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ULBP1Q9BZM6 244 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 NAT10Q9H0A0 1025 aaKnown RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 EBF3Q9H4W6 596 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 NMUR1Q9HB89 426 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 DUS2Q9NX74 493 aaKnown RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 DLGAP2Q9P1A6 1054 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 CFAP97Q9P2B7 532 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 NAGPAQ9UK23 515 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 ZFHX2Q9C0A1 2572 aaPredicted RBP8.06□□□□□ -1.12
TRIM59-204ENST00000471396 OTOGLQ3ZCN5 2332 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 MYOFQ9NZM1 2061 aa8.06□□□□□ -1.12
TRIM59-204ENST00000471396 E2F8A0AVK6 867 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 LGALS16A8MUM7 142 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 BECN2A8MW95 431 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 SLC9A3R1O14745 358 aaPredicted RBP8.05□□□□□ -1.12
TRIM59-204ENST00000471396 NCAM2O15394 837 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 THAP12O43422 761 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 MED7O43513 233 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 NFATC1O95644 943 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 ZBED1O96006 694 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 CALCAP01258 141 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 RARGP13631 454 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 ZNF18P17022 549 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 GNA15P30679 374 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 ATP5C1P36542 298 aaKnown RBP8.05□□□□□ -1.12
TRIM59-204ENST00000471396 USP8P40818 1118 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 TKTL1P51854 596 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 AMPD2Q01433 879 aa8.05□□□□□ -1.12
TRIM59-204ENST00000471396 ADIGQ0VDE8 80 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms