RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TTC30AQ86WT1 665 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 ETFBKMTQ8IXQ9 262 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 CAMKK1Q8N5S9 505 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 IL17RCQ8NAC3 791 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 TMEM176AQ96HP8 235 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 ARRDC1-AS1Q9H2J1 176 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 PNPLA8Q9NP80 782 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 ARHGEF4Q9NR80 690 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 SPHK2Q9NRA0 654 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 NAGPAQ9UK23 515 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 NCOR2Q9Y618 2525 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 SGK1O00141 431 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 HOXC11O43248 304 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 STX10O60499 249 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 TULP3O75386 442 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 KLF8O95600 359 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 CALCAP01258 141 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 KIR2DL1P43626 348 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 DGKEP52429 567 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 ATXN1P54253 815 aaKnown RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 LMNB2Q03252 620 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 CUL2Q13617 745 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 SF3A2Q15428 464 aaKnown RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 GOLGA7BQ2TAP0 167 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 ANO4Q32M45 955 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 C10orf120Q5SQS8 335 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 ANO7Q6IWH7 933 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 PRR23CQ6ZRP0 262 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 CCDC186Q7Z3E2 898 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 GPR161Q8N6U8 529 aaKnown RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 TXNDC5Q8NBS9 432 aaKnown RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 TSTD1Q8NFU3 115 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 NDRG1Q92597 394 aaKnown RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 ARMCX3Q9UH62 379 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-203ENST00000471344 HCN2Q9UL51 889 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 MMP17Q9ULZ9 603 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 USP3Q9Y6I4 520 aa16.17■□□□□ 0.18
COL1A1-203ENST00000471344 PPP1R3GB7ZBB8 358 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 ADAM23O75077 832 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 APODP05090 189 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 TRIM21P19474 475 aaKnown RBP16.16■□□□□ 0.18
COL1A1-203ENST00000471344 ATP5C1P36542 298 aaKnown RBP16.16■□□□□ 0.18
COL1A1-203ENST00000471344 EIF2DP41214 584 aaKnown RBP16.16■□□□□ 0.18
COL1A1-203ENST00000471344 GAD2Q05329 585 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 CSRP2Q16527 193 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 ARHGAP17Q68EM7 881 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 TTI2Q6NXR4 508 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 TPGS1Q6ZTW0 290 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 HTR3DQ70Z44 454 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 PIGZQ86VD9 579 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 MIB1Q86YT6 1006 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 UBR7Q8N806 425 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 MDGA1Q8NFP4 955 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 KAT5Q92993 513 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 BHMTQ93088 406 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 OTUB2Q96DC9 234 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 DUSP15Q9H1R2 295 aaPredicted RBP16.16■□□□□ 0.18
COL1A1-203ENST00000471344 RXFP3Q9NSD7 469 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 EBF1Q9UH73 591 aa16.16■□□□□ 0.18
COL1A1-203ENST00000471344 CDV3Q9UKY7 258 aaKnown RBP16.16■□□□□ 0.18
COL1A1-203ENST00000471344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-203ENST00000471344 DCDC2BA2VCK2 349 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 NEDD8-MDP1E9PL57 170 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 PSMA7O14818 248 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 EPN2O95208 641 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 HMBSP08397 361 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 BCKDHBP21953 392 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 GRIA2P42262 883 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 FMO5P49326 533 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 STX17P56962 302 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 MORC3Q14149 939 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 CRY1Q16526 586 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 PLK5Q496M5 336 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 Q6ZNB5 142 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 TOGARAM2Q6ZUX3 1019 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 BHLHA9Q7RTU4 235 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 NELFBQ8WX92 580 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 ERLEC1Q96DZ1 483 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 FAXDC2Q96IV6 333 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
COL1A1-203ENST00000471344 DNMT3LQ9UJW3 386 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 TSPAN16Q9UKR8 245 aa16.15■□□□□ 0.18
COL1A1-203ENST00000471344 SPTBN2O15020 2390 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 A0A0A0MRY4 1105 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 LRP3O75074 770 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 STC2O76061 302 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 KLKB1P03952 638 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 MRPS21P82921 87 aaKnown RBP16.14■□□□□ 0.17
COL1A1-203ENST00000471344 PDE4CQ08493 712 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 EFEMP1Q12805 493 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 CCDC40Q4G0X9 1142 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 RAB41Q5JT25 222 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 BTBD8Q5XKL5 378 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 TCEAL6Q6IPX3 200 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 RASSF3Q86WH2 238 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 FRMD1Q8N878 549 aa16.14■□□□□ 0.17
COL1A1-203ENST00000471344 TERB1Q8NA31 727 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms