RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DPP6P42658 865 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 KIR2DL1P43626 348 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 MTIF2P46199 727 aaKnown RBP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 DHPSP49366 369 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 SEC13P55735 322 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 IRX4P78413 519 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 FANCCQ00597 558 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 CYP27A1Q02318 531 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ENPEPQ07075 957 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 MESP2Q0VG99 397 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 LMAN2Q12907 356 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 DHCR24Q15392 516 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 DUOXA2Q1HG44 320 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 FILIP1LQ4L180 1135 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 HSP90AA4PQ58FG1 418 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 PEAR1Q5VY43 1037 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 RHBDF2Q6PJF5 856 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 INTS8Q75QN2 995 aaKnown RBP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 CBWD2Q8IUF1 395 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 FAM186BQ8IYM0 893 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 CCDC33Q8N5R6 958 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ALLCQ8N6M5 410 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 WHAMMQ8TF30 809 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 EEF2KMTQ96G04 330 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 SPACA7Q96KW9 195 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ADAM33Q9BZ11 813 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 RNF38Q9H0F5 515 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ARMCX3Q9UH62 379 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-206ENST00000471037 CPQQ9Y646 472 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 LAMA1P25391 3075 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 FRYQ5TBA9 3013 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 LRRC10BA6NIK2 292 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 SGK1O00141 431 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 STAU1O95793 577 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 ADH1CP00326 375 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 APODP05090 189 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PDGFRBP09619 1106 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 KRT13P13646 458 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 HOXD12P35452 270 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 GRIA2P42262 883 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 CASP4P49662 377 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 FOXC1Q12948 553 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TAF10Q12962 218 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 KRT31Q15323 416 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 SNRNP35Q16560 246 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 MAN2A1Q16706 1144 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TRIM61Q5EBN2 209 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 EOGTQ5NDL2 527 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TDRD10Q5VZ19 366 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 LPCAT2Q7L5N7 544 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TRAPPC11Q7Z392 1133 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 C12orf40Q86WS4 652 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 CREBRFQ8IUR6 639 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 SYT12Q8IV01 421 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TRIM59Q8IWR1 403 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TXNDC5Q8NBS9 432 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PDZD8Q8NEN9 1154 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 OVCA2Q8WZ82 227 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PIGKQ92643 395 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 ANP32BQ92688 251 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 GATA6Q92908 595 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 OTUB2Q96DC9 234 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 SLITRK1Q96PX8 696 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 MMS19Q96T76 1030 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 MRPL45Q9BRJ2 306 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TUBGCP2Q9BSJ2 902 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 ELOVL4Q9GZR5 314 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TMEM30AQ9NV96 361 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TBC1D14Q9P2M4 693 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 NME7Q9Y5B8 376 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 TNRC6BQ9UPQ9 1833 aaKnown RBP9.6□□□□□ -0.87
SF3A1-206ENST00000471037 PLXND1Q9Y4D7 1925 aa9.6□□□□□ -0.87
SF3A1-206ENST00000471037 ABCA7Q8IZY2 2146 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ASPMQ8IZT6 3477 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 FAM208BQ5VWN6 2430 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 A0A1B0GTH6 734 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 E2F8A0AVK6 867 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 LGALS16A8MUM7 142 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 UPK3BL1B0FP48 263 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 UPK3BL2E5RIL1 263 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ADAM23O75077 832 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 KLF8O95600 359 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ADH5P11766 374 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 PTPN1P18031 435 aaKnown RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TIE1P35590 1138 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 PTGER3P43115 390 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TNFRSF4P43489 277 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 SLC6A11P48066 632 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 COPB1P53618 953 aaKnown RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms