RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 DMRTC2Q8IXT2 367 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 COLGALT2Q8IYK4 626 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CMTR2Q8IYT2 770 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CRYBG2Q8N1P7 616 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 THEM5Q8N1Q8 247 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 PDCL2Q8N4E4 241 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SLC4A11Q8NBS3 891 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 OR6B3Q8NGW1 331 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 LNX1Q8TBB1 728 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SLC20A1Q8WUM9 679 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 RFFLQ8WZ73 363 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 DDX1Q92499 740 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SECISBP2LQ93073 1101 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 TOP1MTQ969P6 601 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 PLD4Q96BZ4 506 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 HEXIM2Q96MH2 286 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CASD1Q96PB1 797 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SDCBP2Q9H190 292 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 KCNH6Q9H252 994 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CXCL16Q9H2A7 254 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 LHX5Q9H2C1 402 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 UBE2ZQ9H832 354 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 LZTFL1Q9NQ48 299 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 FRRS1LQ9P0K9 344 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 HESX1Q9UBX0 185 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 STRIP2Q9ULQ0 834 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 NENFQ9UMX5 172 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 L1RE1Q9UN81 338 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 FAN1Q9Y2M0 1017 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 REXO2Q9Y3B8 237 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SF3B1O75533 1304 aaKnown RBP eCLIP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 ZFHX2Q9C0A1 2572 aaPredicted RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 PTPRDP23468 1912 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 PTPRSQ13332 1948 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TBKBP1A7MCY6 615 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 GABRDO14764 452 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 PPEF2O14830 753 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ZNF263O14978 683 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TADA2AO75478 443 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 CYP1A1P04798 512 aaPredicted RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 MMEP08473 750 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ALADP13716 330 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 CHRNB2P17787 502 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 LAG3P18627 525 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 RAP1GAPP47736 663 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 OR1G1P47890 313 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ALDH7A1P49419 539 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 GALCP54803 685 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 HADHBP55084 474 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 WDR5P61964 334 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 NOMO3P69849 1222 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 GPC5P78333 572 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TSPY1Q01534 308 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 HYAL2Q12891 473 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TUBB2AQ13885 445 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TCEAL1Q15170 157 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TCTN1Q2MV58 587 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 PLA2G4EQ3MJ16 856 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ZNF394Q53GI3 561 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ARHGAP17Q68EM7 881 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 PHF13Q86YI8 300 aaPredicted RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 SYCE1Q8N0S2 351 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 B3GALNT2Q8NCR0 500 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 TRIM58Q8NG06 486 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 KIF18AQ8NI77 898 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 IPO4Q8TEX9 1081 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 GDPD5Q8WTR4 605 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ELMO3Q96BJ8 720 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 C16orf45Q96MC5 204 aaPredicted RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 ACBD6Q9BR61 282 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 MRPL45Q9BRJ2 306 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 TUBB2BQ9BVA1 445 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ELOVL4Q9GZR5 314 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 MRPL47Q9HD33 250 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 DDX43Q9NXZ2 648 aaKnown RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 WDR35Q9P2L0 1181 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 UVRAGQ9P2Y5 699 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 GTF3C4Q9UKN8 822 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 ADAM28Q9UKQ2 775 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 CDH9Q9ULB4 789 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 GUCA1BQ9UMX6 200 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 WDR3Q9UNX4 943 aaKnown RBP eCLIP7□□□□□ -1.29
VAMP3-202ENST00000470357 SCINQ9Y6U3 715 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 SPTBN4Q9H254 2564 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 NCANO14594 1321 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 COL4A4P53420 1690 aaPredicted RBP7□□□□□ -1.29
VAMP3-202ENST00000470357 COL4A6Q14031 1691 aa7□□□□□ -1.29
VAMP3-202ENST00000470357 VWA8A3KMH1 1905 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 CACNA1AO00555 2505 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 USP27XA6NNY8 438 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 H7C4K7 107 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 O00370 1275 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 NRP1O14786 923 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 DDHD2O94830 711 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 ITGB2P05107 769 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 UNGP13051 313 aaPredicted RBP6.99□□□□□ -1.29
VAMP3-202ENST00000470357 TNNT1P13805 278 aa6.99□□□□□ -1.29
VAMP3-202ENST00000470357 KCNA5P22460 613 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms