RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CRTAC1Q9NQ79 661 aa12.77□□□□□ -0.37
LSM2-209ENST00000470083 CDH9Q9ULB4 789 aa12.77□□□□□ -0.37
LSM2-209ENST00000470083 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
LSM2-209ENST00000470083 SNX11Q9Y5W9 270 aa12.77□□□□□ -0.37
LSM2-209ENST00000470083 TISP43B9A030 160 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 WASH3PC4AMC7 463 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 F8VP50 259 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 LAD1O00515 517 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 COCHO43405 550 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 PRPHP41219 470 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 IL12RB1P42701 662 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 ZNF131P52739 623 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 GTF2BQ00403 316 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 TEAD4Q15561 434 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 IL17AQ16552 155 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 TDRD10Q5VZ19 366 aaKnown RBP12.76□□□□□ -0.37
LSM2-209ENST00000470083 FMNL3Q8IVF7 1028 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 TMEM176AQ96HP8 235 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 C8orf48Q96LL4 319 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 XPO6Q96QU8 1125 aaKnown RBP12.76□□□□□ -0.37
LSM2-209ENST00000470083 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 NUP58Q9BVL2 599 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 PARVGQ9HBI0 331 aa12.76□□□□□ -0.37
LSM2-209ENST00000470083 NOL7Q9UMY1 257 aaKnown RBP12.76□□□□□ -0.37
LSM2-209ENST00000470083 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
LSM2-209ENST00000470083 TRAK2O60296 914 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 C1SP09871 688 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 C6P13671 934 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 PLCG1P19174 1290 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 LMO2P25791 158 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 GRIA4P48058 902 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 ZNF132P52740 706 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 CLDN6P56747 220 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 CYP27A1Q02318 531 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 TARDBPQ13148 414 aaKnown RBP eCLIP12.75□□□□□ -0.37
LSM2-209ENST00000470083 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 DTHD1Q6ZMT9 781 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 DPH6Q7L8W6 267 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 PCED1BQ96HM7 432 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 OSGEPQ9NPF4 335 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 MYOFQ9NZM1 2061 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 ITGA11Q9UKX5 1188 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 ANKRD6Q9Y2G4 727 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 SLCO1B1Q9Y6L6 691 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
LSM2-209ENST00000470083 USP9XQ93008 2570 aaPredicted RBP12.74□□□□□ -0.37
LSM2-209ENST00000470083 NEDD8-MDP1E9PL57 170 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 H0Y8X5 98 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 BRINP1O60477 761 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 RFPL3O75679 317 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 FAM13AO94988 1023 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 TYRP14679 529 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 ACTN2P35609 894 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 TUBP50607 506 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 WNT7BP56706 349 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 CCDC173Q0VFZ6 552 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 ORC1Q13415 861 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 HECTD3Q5T447 861 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 HES3Q5TGS1 186 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 SCARA3Q6AZY7 606 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
LSM2-209ENST00000470083 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 TMPRSS6Q8IU80 811 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 PDZD8Q8NEN9 1154 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 MYCBPAPQ8TBZ2 947 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
LSM2-209ENST00000470083 OVCA2Q8WZ82 227 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 SNX19Q92543 992 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 PLIN2Q99541 437 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 BBS2Q9BXC9 721 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 MARK1Q9P0L2 795 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 WDR35Q9P2L0 1181 aa12.74□□□□□ -0.37
LSM2-209ENST00000470083 KCNK3O14649 394 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 ENC1O14682 589 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 NPC1O15118 1278 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 SLC28A2O43868 658 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 YWHAQP27348 245 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 ADSSP30520 456 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 DGKGP49619 791 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 CSRP3P50461 194 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 RBP5P82980 135 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 ENPP2Q13822 863 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 POSTNQ15063 836 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 TBC1D25Q3MII6 688 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 TMEM119Q4V9L6 283 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 SNX30Q5VWJ9 437 aa12.73□□□□□ -0.37
LSM2-209ENST00000470083 BRSK2Q8IWQ3 736 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms