RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 MAD1L1Q9Y6D9 718 aa9.82□□□□□ -0.84
TOP3A-203ENST00000469739 PLXNB2O15031 1838 aa9.82□□□□□ -0.84
TOP3A-203ENST00000469739 C6orf222P0C671 652 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 GCAP28676 217 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 CDC25CP30307 473 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 GRIA1P42261 906 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 BCAR1P56945 870 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 WDR4P57081 412 aaKnown RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 IRX4P78413 519 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 SLC5A9Q2M3M2 681 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ARRDC4Q8NCT1 418 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 WDR83Q9BRX9 315 aaKnown RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ABHD16BQ9H3Z7 469 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 DDX56Q9NY93 547 aaKnown RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 IL1RAPL1Q9NZN1 696 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 CLUHO75153 1309 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 A6NJR5 290 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 C2CD4BA6NLJ0 364 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 PAEPP09466 180 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ELK3P41970 407 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 GTF2A2P52657 109 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ROR1Q01973 937 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 LMNB2Q03252 620 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 PPP1R21Q6ZMI0 780 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 SYDE1Q6ZW31 735 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 TP53INP2Q8IXH6 220 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 SNRNP25Q9BV90 132 aaKnown RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 LHX5Q9H2C1 402 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ETNK2Q9NVF9 386 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 CORO1CQ9ULV4 474 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 BEST1O76090 585 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 PGK1P00558 417 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ZNF16P17020 682 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 AMPD1P23109 780 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 CDH5P33151 784 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 GNL1P36915 607 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ZNF143P52747 638 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 DPYSL3Q14195 570 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ZNF268Q14587 947 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 SLC1A5Q15758 541 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 SEPT7Q16181 437 aaKnown RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 BBS12Q6ZW61 710 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ANKS4BQ8N8V4 417 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 CNPY3Q9BT09 278 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ROPN1BQ9BZX4 212 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 ROPN1Q9HAT0 212 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-203ENST00000469739 SLC17A6Q9P2U8 582 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 STK38LQ9Y2H1 464 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 L3MBTL1Q9Y468 752 aa9.81□□□□□ -0.84
TOP3A-203ENST00000469739 NUP205Q92621 2012 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 SMIM28A0A1B0GU29 152 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CCDC78A2IDD5 438 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 MYADML2A6NDP7 307 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 UBOX5O94941 541 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 ZBED1O96006 694 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CAV1Q03135 178 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 OLIG2Q13516 323 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 TAF1CQ15572 869 aaPredicted RBP9.8□□□□□ -0.84
TOP3A-203ENST00000469739 DCAF6Q58WW2 860 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 SLC27A1Q6PCB7 646 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CXCL17Q6UXB2 119 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 UNC5BQ8IZJ1 945 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CCDC185Q8N715 623 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PPM1NQ8N819 430 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CCDC63Q8NA47 563 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 BBOF1Q8ND07 529 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 MCRS1Q96EZ8 462 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 RMDN2Q96LZ7 410 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 RHOBTB2Q9BYZ6 727 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 DCTN4Q9UJW0 460 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 GRID1Q9ULK0 1009 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 TTC3P53804 2025 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.8□□□□□ -0.84
TOP3A-203ENST00000469739 KBTBD13C9JR72 458 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 UGT1A9O60656 530 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 TKTP29401 623 aaKnown RBP9.8□□□□□ -0.84
TOP3A-203ENST00000469739 TAP1Q03518 808 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 ENPEPQ07075 957 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 BMPR2Q13873 1038 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 LRRC38Q5VT99 294 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CASC4Q6P4E1 433 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 SLC30A9Q6PML9 568 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PRPF39Q86UA1 669 aaKnown RBP9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PDIK1LQ8N165 341 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 DRAXINQ8NBI3 349 aaPredicted RBP9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PCDH19Q8TAB3 1148 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CCHCR1Q8TD31 782 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 CCT6BQ92526 530 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 KCNN1Q92952 543 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 SMC6Q96SB8 1091 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 MED10Q9BTT4 135 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 PITPNM3Q9BZ71 974 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 SNX25Q9H3E2 840 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 UGT1A7Q9HAW7 530 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 UGT1A10Q9HAW8 530 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 UGT1A8Q9HAW9 530 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 ITGA11Q9UKX5 1188 aa9.8□□□□□ -0.84
TOP3A-203ENST00000469739 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
TOP3A-203ENST00000469739 AHCYL1O43865 530 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms