RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 LIN54Q6MZP7 749 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 CASC1Q6TDU7 716 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 VSIG1Q86XK7 387 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 GALNT13Q8IUC8 556 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 HERC6Q8IVU3 1022 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 LMNTD2Q8IXW0 634 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 LNX2Q8N448 690 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SH2D3CQ8N5H7 860 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 IPO4Q8TEX9 1081 aaKnown RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SCARB1Q8WTV0 552 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 STYXQ8WUJ0 223 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 IPCEF1Q8WWN9 437 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 STON2Q8WXE9 905 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 IQCDQ96DY2 449 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SUCLG2Q96I99 432 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 AGXT2Q9BYV1 514 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 PAIP1Q9H074 479 aaKnown RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 UNKLQ9H9P5 680 aaKnown RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 DBNDD1Q9H9R9 158 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SAYSD1Q9NPB0 183 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SERHLQ9NQF3 203 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 LANCL2Q9NS86 450 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 ATP8A2Q9NTI2 1148 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 RBM12Q9NTZ6 932 aaKnown RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 ARGLU1Q9NWB6 273 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 ZNF112Q9UJU3 913 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 PCDHB1Q9Y5F3 818 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 CCDC196A0A1B0GTZ2 297 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 PROB1E7EW31 1015 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 H7C0S8 307 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 TEX33O43247 280 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 URI1O94763 535 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 RARBP10826 455 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 GSPT1P15170 499 aaKnown RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 MUTP22033 750 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 SCP2P22307 547 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 PSMA3P25788 255 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 SREBF1P36956 1147 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ARF3P61204 181 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ARF1P84077 181 aaKnown RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 UBE3AQ05086 875 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 CDC16Q13042 620 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 CUL4AQ13619 759 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ADRM1Q16186 407 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 MUM1L1Q5H9M0 696 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 NUGGCQ68CJ6 796 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 OTUD7BQ6GQQ9 843 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 SLC30A6Q6NXT4 461 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ZNF529Q6P280 563 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 HEATR3Q7Z4Q2 680 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 GRASPQ7Z6J2 395 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 C3orf20Q8ND61 904 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ADAMTS15Q8TE58 950 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 SSH3Q8TE77 659 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ST8SIA4Q92187 359 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 SH3KBP1Q96B97 665 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 CCDC34Q96HJ3 373 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 FAM167AQ96KS9 214 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 UROC1Q96N76 676 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 PNKPQ96T60 521 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ADPGKQ9BRR6 497 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ADI1Q9BV57 179 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 EIF2AQ9BY44 585 aaKnown RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 GREM2Q9H772 168 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 CNNM1Q9NRU3 951 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 SACM1LQ9NTJ5 587 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 TMEM140Q9NV12 185 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 PNPOQ9NVS9 261 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 ASB6Q9NWX5 421 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 COL20A1Q9P218 1284 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 IGSF9Q9P2J2 1179 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 PCDHA3Q9Y5H8 950 aa5.11□□□□□ -1.59
SCFD1-205ENST00000469043 COL3A1P02461 1466 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-205ENST00000469043 FAM234BA2RU67 622 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 CCDC151A5D8V7 595 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 C19orf81C9J6K1 198 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 FAM155BO75949 473 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 HSPA4LO95757 839 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ALAS1P13196 640 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 GYS1P13807 737 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 IDEP14735 1019 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 FOLR3P41439 243 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 MCAMP43121 646 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 SLC12A1Q13621 1099 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 RAB30Q15771 203 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 TSTQ16762 297 aaKnown RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 DNAJC21Q5F1R6 531 aaKnown RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ACAD10Q6JQN1 1059 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ZNF449Q6P9G9 518 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 B4GALNT4Q76KP1 1039 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 KDELC2Q7Z4H8 507 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 MSANTD4Q8NCY6 345 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 CYP2W1Q8TAV3 490 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 OTUD7AQ8TE49 926 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 AFG1LQ8WV93 481 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 ATP2A3Q93084 1043 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 CCDC47Q96A33 483 aaKnown RBP5.1□□□□□ -1.59
SCFD1-205ENST00000469043 TBC1D31Q96DN5 1066 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 MED15Q96RN5 788 aa5.1□□□□□ -1.59
SCFD1-205ENST00000469043 TXLNGYQ9BZA5 131 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms