RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PTGR1Q14914 329 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 CCDC157Q569K6 752 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 FAM57BQ71RH2 274 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 MIER2Q8N344 545 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 MGAT4CQ9UBM8 478 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 WNT16Q9UBV4 365 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 DRG1Q9Y295 367 aaKnown RBP4.63□□□□□ -1.67
XRN1-206ENST00000467077 CEP164Q9UPV0 1460 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 F8W810 466 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 CLIC1O00299 241 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 PCDHGA12O60330 932 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 LDB3O75112 727 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 POLD2P49005 469 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 GUCY2FP51841 1108 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 CFHR3Q02985 330 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 MTMR1Q13613 665 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 ZIK1Q3SY52 487 aaPredicted RBP4.62□□□□□ -1.67
XRN1-206ENST00000467077 SYDE2Q5VT97 1194 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 EFCAB2Q5VUJ9 269 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 PRPF38AQ8NAV1 312 aaKnown RBP4.62□□□□□ -1.67
XRN1-206ENST00000467077 WIPF2Q8TF74 440 aaPredicted RBP4.62□□□□□ -1.67
XRN1-206ENST00000467077 TRMT61AQ96FX7 289 aaKnown RBP4.62□□□□□ -1.67
XRN1-206ENST00000467077 SARS2Q9NP81 518 aaKnown RBP4.62□□□□□ -1.67
XRN1-206ENST00000467077 ANAPC4Q9UJX5 808 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 USP22Q9UPT9 525 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 PCDHGA9Q9Y5G4 932 aaKnown RBP4.62□□□□□ -1.67
XRN1-206ENST00000467077 PCDHGA8Q9Y5G5 932 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 PCDHGA7Q9Y5G6 932 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 PCDHGA6Q9Y5G7 932 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 PCDHGA3Q9Y5H0 932 aa4.62□□□□□ -1.67
XRN1-206ENST00000467077 MROH2BQ7Z745 1585 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 ATF7P17544 494 aaPredicted RBP4.61□□□□□ -1.67
XRN1-206ENST00000467077 PRKAR1BP31321 381 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 UCP3P55916 312 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 DDR1Q08345 913 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 PNMA8AQ86V59 439 aaPredicted RBP4.61□□□□□ -1.67
XRN1-206ENST00000467077 SPARTQ8N0X7 666 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 SLC44A5Q8NCS7 719 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 ARL8BQ9NVJ2 186 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 MSRB1Q9NZV6 116 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 TRHDEQ9UKU6 1024 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 PCDHA12Q9UN75 941 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 WIZO95785 1651 aa4.61□□□□□ -1.67
XRN1-206ENST00000467077 PRDM2Q13029 1718 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 ZNF814B7Z6K7 855 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 H3BUI4 141 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 AKAP10O43572 662 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 TLX3O43711 291 aaPredicted RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 KATNA1O75449 491 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 PLAUP00749 431 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 SLC12A2P55011 1212 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 CCNIQ14094 377 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 FAM50AQ14320 339 aaKnown RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 KPNB1Q14974 876 aaKnown RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 IZUMO4Q1ZYL8 232 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 ABCB5Q2M3G0 1257 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 EARS2Q5JPH6 523 aaKnown RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 BPIFB1Q8TDL5 484 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 ELP5Q8TE02 316 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 WBP2Q969T9 261 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 MTMR8Q96EF0 704 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 MESP1Q9BRJ9 268 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 CCDC8Q9H0W5 538 aaPredicted RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 C6orf106Q9H6K1 298 aaPredicted RBP4.6□□□□□ -1.67
XRN1-206ENST00000467077 ZSCAN32Q9NX65 697 aa4.6□□□□□ -1.67
XRN1-206ENST00000467077 ALG1L2C9J202 215 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 CHD1O14646 1710 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 GABRDO14764 452 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 ARHGEF11O15085 1522 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 HOXA11P31270 313 aaPredicted RBP4.59□□□□□ -1.67
XRN1-206ENST00000467077 EVA1CP58658 441 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 KRT85P78386 507 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 ITKQ08881 620 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 KHDC1LQ5JSQ8 128 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 MORC1Q86VD1 984 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 OIT3Q8WWZ8 545 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 FANCD2Q9BXW9 1451 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 GBA2Q9HCG7 927 aaPredicted RBP4.59□□□□□ -1.67
XRN1-206ENST00000467077 COL4A3BPQ9Y5P4 624 aa4.59□□□□□ -1.67
XRN1-206ENST00000467077 SHTN1A0MZ66 631 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 ACAA1P09110 424 aaPredicted RBP4.58□□□□□ -1.68
XRN1-206ENST00000467077 TCEA1P23193 301 aaKnown RBP4.58□□□□□ -1.68
XRN1-206ENST00000467077 EPHA3P29320 983 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 SLC11A2P49281 568 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 MAP2K6P52564 334 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 BCAT1P54687 386 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 PCBP2Q15366 365 aaKnown RBP eCLIP4.58□□□□□ -1.68
XRN1-206ENST00000467077 WASHC2DQ5SRD0 308 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 CYB5RLQ6IPT4 315 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 RBM23Q86U06 439 aaKnown RBP4.58□□□□□ -1.68
XRN1-206ENST00000467077 GAS2L3Q86XJ1 694 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 BCAS4Q8TDM0 211 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 PPP2R3CQ969Q6 453 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 MTFMTQ96DP5 389 aaKnown RBP4.58□□□□□ -1.68
XRN1-206ENST00000467077 NUAK2Q9H093 628 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 FZD3Q9NPG1 666 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 PCDH12Q9NPG4 1184 aa4.58□□□□□ -1.68
XRN1-206ENST00000467077 CNNM1Q9NRU3 951 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms