RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 C3orf38Q5JPI3 329 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 TMEM63BQ5T3F8 832 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 RUSC1-AS1Q66K80 236 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 RANBP10Q6VN20 620 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 MEPCEQ7L2J0 689 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 PNPLA1Q8N8W4 532 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 HIC2Q96JB3 615 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 MARK4Q96L34 752 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 CAMK1GQ96NX5 476 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 MLXIPLQ9NP71 852 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 DKK4Q9UBT3 224 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 MID2Q9UJV3 735 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 TTC3P53804 2025 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 CTNND1O60716 968 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 PRAMEF2O60811 474 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 SCGB1D2O95969 90 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 BRAFP15056 766 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 CPT1AP50416 773 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 RPS13P62277 151 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 ZNF91Q05481 1191 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 FHL3Q13643 280 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 CLCA4Q14CN2 919 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 MFSD13AQ14CX5 517 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 CNGA2Q16280 664 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 GPR162Q16538 588 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 FAM102BQ5T8I3 360 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 NXNQ6DKJ4 435 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 ANO7Q6IWH7 933 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 UBE2Q1Q7Z7E8 422 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 SESTD1Q86VW0 696 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 ZNF548Q8NEK5 533 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 ZFYVE19Q96K21 471 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 ZNF668Q96K58 619 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 MSLNLQ96KJ4 702 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 FOXP1Q9H334 677 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 SACM1LQ9NTJ5 587 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 FZD4Q9ULV1 537 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 CAPN11Q9UMQ6 739 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 COL15A1P39059 1388 aa3.63□□□□□ -1.83
GTF3C3-209ENST00000466862 CCDC187A0A096LP49 1063 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 MYMKA6NI61 221 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 CLIC1O00299 241 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 RRHO14718 337 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 SNHG28P0DPA3 235 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 PSG1P11464 419 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 ADRA1DP25100 572 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 NTSR1P30989 418 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 CCKARP32238 428 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 HTR6P50406 440 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 GATMP50440 423 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 ITGA8P53708 1063 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 ST3GAL2Q16842 350 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 MIDNQ504T8 468 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 VSTM1Q6UX27 236 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 PELI3Q8N2H9 469 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 ARFGAP1Q8N6T3 406 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 C12orf76Q8N812 135 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 NSMCE1Q8WV22 266 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 ZDHHC12Q96GR4 267 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 CHST8Q9H2A9 424 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 FAM83DQ9H4H8 585 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 C1orf112Q9NSG2 853 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 MGAT4CQ9UBM8 478 aa3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 DDX20Q9UHI6 824 aaKnown RBP3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 TTBK1Q5TCY1 1321 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-209ENST00000466862 CFAP69A5D8W1 941 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 AQP7P3A6NL99 342 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 RAB27BO00194 218 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 FYB1O15117 783 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 RGS10O43665 173 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 RASSF9O75901 435 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 RBL1P28749 1068 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 ANAPC15P60006 121 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 FMO1Q01740 532 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 MTAPQ13126 283 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 MTX1Q13505 466 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 GALEQ14376 348 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 POLD3Q15054 466 aaPredicted RBP3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 MANEALQ5VSG8 457 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 GRHL2Q6ISB3 625 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 TFAP2DQ7Z6R9 452 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 ANKRD13BQ86YJ7 626 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 TCEAL8Q8IYN2 117 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 MAGEB6Q8N7X4 407 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 LRTOMTQ8WZ04 291 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 HS6ST2Q96MM7 605 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 GATA5Q9BWX5 397 aaPredicted RBP3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 STK31Q9BXU1 1019 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 AS3MTQ9HBK9 375 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 VPS45Q9NRW7 570 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 PI4KBQ9UBF8 816 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 SLC27A6Q9Y2P4 619 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 SPATA31A1Q5TZJ5 1347 aa3.61□□□□□ -1.83
GTF3C3-209ENST00000466862 IGKV2D-30A0A075B6S6 120 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 FAM90A8PA6NJQ4 464 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 CD8B2A6NJW9 211 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 C2CD4BA6NLJ0 364 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms