RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 FAM90A8PA6NJQ4 464 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 ISM1B1AKI9 464 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 CTNND1O60716 968 aaKnown RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 ALPLP05186 524 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 FAM90A13PP0C7W8 464 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 FAM90A24PP0C7X0 464 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 HGFP14210 728 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 TACR3P29371 465 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 RAB27AP51159 221 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 SUMO3P55854 103 aaPredicted RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 STIM1Q13586 685 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 SLC29A2Q14542 456 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 PFKFB3Q16875 520 aaPredicted RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 MEPCEQ7L2J0 689 aaKnown RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 COL23A1Q86Y22 540 aaPredicted RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 ZNF548Q8NEK5 533 aaPredicted RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 EDC3Q96F86 508 aaKnown RBP4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 GPATCH3Q96I76 525 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 VPS50Q96JG6 964 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 STK31Q9BXU1 1019 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 C22orf23Q9BZE7 217 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 CDH19Q9H159 772 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 FAM83DQ9H4H8 585 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 STK32BQ9NY57 414 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 CPNE7Q9UBL6 633 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 HDAC9Q9UKV0 1011 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 USP19O94966 1318 aa4.72□□□□□ -1.65
CHMP2B-202ENST00000466696 AQP7P3A6NL99 342 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 FAM227AF5H4B4 570 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 FRS3O43559 492 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 TOMM40O96008 361 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 PARP1P09874 1014 aaKnown RBP4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 U2AF1L5P0DN76 240 aaPredicted RBP4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 BRAFP15056 766 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 MCM5P33992 734 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 ITGA8P53708 1063 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 ANAPC15P60006 121 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 YPEL5P62699 121 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 U2AF1Q01081 240 aaKnown RBP eCLIP4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 SLC14A1Q13336 389 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 FAM110CQ1W6H9 321 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 LVRNQ6Q4G3 990 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 ZCWPW1Q9H0M4 648 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 DDX56Q9NY93 547 aaKnown RBP4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 RGS17Q9UGC6 210 aaPredicted RBP4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 AFF4Q9UHB7 1163 aaKnown RBP4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 TPCN1Q9ULQ1 816 aa4.71□□□□□ -1.66
CHMP2B-202ENST00000466696 CFAP69A5D8W1 941 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 B4DGG1 531 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 INMTO95050 263 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 CD63P08962 238 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 PDGFRBP09619 1106 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 MYBP10242 640 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 ADRA1DP25100 572 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 ACVR2AP27037 513 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 CPA2P48052 419 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 CPT1AP50416 773 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 EPHB1P54762 984 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 TXNL4AP83876 142 aaKnown RBP4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 STK3Q13188 491 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 SEMA3AQ14563 771 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 CNN3Q15417 329 aaKnown RBP4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 SWSAP1Q6NVH7 229 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 KIAA0319LQ8IZA0 1049 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 FAM71DQ8N9W8 422 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 KAZALD1Q96I82 304 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 FAM234AQ9H0X4 552 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 ASAP1Q9ULH1 1129 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 RIMKLBQ9ULI2 386 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 FZD4Q9ULV1 537 aa4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.7□□□□□ -1.66
CHMP2B-202ENST00000466696 hCG_2014768A0A024R1R8 64 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 AGPSO00116 658 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 RAB27BO00194 218 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 FYB1O15117 783 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 INPPL1O15357 1258 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 SNX2O60749 519 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 ZKSCAN1P17029 563 aaPredicted RBP4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 TPH1P17752 444 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 HTR6P50406 440 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 NANOS2P60321 138 aaKnown RBP4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 GPC5P78333 572 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 DEUP1Q05D60 604 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 MTX1Q13505 466 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 CNGA2Q16280 664 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 DAB2IPQ5VWQ8 1189 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 MZT2AQ6P582 158 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 APOA5Q6Q788 366 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 YAF2Q8IY57 180 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 MMP21Q8N119 569 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 METTL25Q8N6Q8 603 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 ACRBPQ8NEB7 543 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 SPATA3Q8NHX4 192 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 RUNDC1Q96C34 613 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 HIST1H2AAQ96QV6 131 aa4.69□□□□□ -1.66
CHMP2B-202ENST00000466696 ZIM2Q9NZV7 527 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms