RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SYTL1Q8IYJ3 562 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 ADAMTS15Q8TE58 950 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 SOCS4Q8WXH5 440 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 TMEM41AQ96HV5 264 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 WDR12Q9GZL7 423 aaKnown RBP5.08□□□□□ -1.6
LRCH3-211ENST00000466054 GBA2Q9HCG7 927 aaPredicted RBP5.08□□□□□ -1.6
LRCH3-211ENST00000466054 NECTIN3Q9NQS3 549 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 GJB4Q9NTQ9 266 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 PCDHGB2Q9Y5G2 931 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 SNX14Q9Y5W7 946 aa5.08□□□□□ -1.6
LRCH3-211ENST00000466054 FER1L4A9Z1Z3 1794 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 A0A087WZ62 844 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 ADM5C9JUS6 153 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 PPEF2O14830 753 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 ZFXP17010 805 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-211ENST00000466054 CERS1P27544 350 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 GABRB3P28472 473 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 UQCRC1P31930 480 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 ALDH9A1P49189 494 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 ITGA8P53708 1063 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 SP2Q02086 613 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 TNFAIP2Q03169 654 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 MANEALQ5VSG8 457 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 MRNIPQ6NTE8 343 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 ZNF782Q6ZMW2 699 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-211ENST00000466054 KIAA0408Q6ZU52 694 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 YTHDF3Q7Z739 585 aaKnown RBP5.07□□□□□ -1.6
LRCH3-211ENST00000466054 NEK8Q86SG6 692 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 RAB11FIP4Q86YS3 637 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 RASAL3Q86YV0 1011 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 MYLK4Q86YV6 388 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-211ENST00000466054 ENAHQ8N8S7 591 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-211ENST00000466054 TMEM171Q8WVE6 324 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 GLG1Q92896 1179 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 RFKQ969G6 155 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 HMCESQ96FZ2 354 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 TTLL2Q9BWV7 592 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 TRIM36Q9NQ86 728 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 RGL1Q9NZL6 768 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 TMOD4Q9NZQ9 345 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 DNAJB11Q9UBS4 358 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 USP22Q9UPT9 525 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 HPSEQ9Y251 543 aa5.07□□□□□ -1.6
LRCH3-211ENST00000466054 A1L4Q6 167 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 VWC2LB2RUY7 222 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 PRR23D1E9PI22 279 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 GCOM1H8Y6P7 765 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 COQ9O75208 318 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 URI1O94763 535 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 PRKCBP05771 671 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 PDHA1P08559 390 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 IL6RP08887 468 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 PRR23D2P0DMB1 279 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 EGR1P18146 543 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 SLC5A2P31639 672 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 LIPAP38571 399 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 MMP13P45452 471 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 MTHFSP49914 203 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 GATMP50440 423 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 PGDP52209 483 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 STK3Q13188 491 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 STARD3Q14849 445 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 SLC5A9Q2M3M2 681 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 TREML2Q5T2D2 321 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 FAXCQ5TGI0 409 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 FBXO38Q6PIJ6 1188 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 CRTC1Q6UUV9 634 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 ZNF551Q7Z340 670 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 WDR53Q7Z5U6 358 aaPredicted RBP5.06□□□□□ -1.6
LRCH3-211ENST00000466054 C17orf80Q9BSJ5 609 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 VN1R3Q9BXE9 311 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 SLC25A32Q9H2D1 315 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 ELOVL5Q9NYP7 299 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 VPS51Q9UID3 782 aa5.06□□□□□ -1.6
LRCH3-211ENST00000466054 FAM234BA2RU67 622 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 GOLGA6L3A6NEY3 463 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 LINC00473A8K010 186 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 M0R3H8 397 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 PSMD9O00233 223 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 PODXLO00592 558 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CCNT2O60583 730 aaKnown RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 TJP3O95049 919 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 NDST3O95803 873 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 DLDP09622 509 aaKnown RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CD19P15391 556 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 ATICP31939 592 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 IL6STP40189 918 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 TIRAPP58753 221 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CHAF1AQ13111 956 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 KCNAB1Q14722 419 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CLCA4Q14CN2 919 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 MAPKAPK3Q16644 382 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 PGBD2Q6P3X8 592 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 ANKRD16Q6P6B7 361 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 MTHFD1LQ6UB35 978 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 CCDC28AQ8IWP9 274 aa5.05□□□□□ -1.6
LRCH3-211ENST00000466054 SAMD14Q8IZD0 417 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-211ENST00000466054 GLIS1Q8NBF1 620 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms