RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 THG1LQ9NWX6 298 aaKnown RBP21.32■■□□□ 1
SKA3-205ENST00000465471 SMPD4Q9NXE4 827 aa21.32■■□□□ 1
SKA3-205ENST00000465471 TJP2Q9UDY2 1190 aa21.32■■□□□ 1
SKA3-205ENST00000465471 LSM8O95777 96 aaKnown RBP21.31■■□□□ 1
SKA3-205ENST00000465471 MMEP08473 750 aa21.31■■□□□ 1
SKA3-205ENST00000465471 FMO1Q01740 532 aa21.31■■□□□ 1
SKA3-205ENST00000465471 TAF3Q5VWG9 929 aa21.31■■□□□ 1
SKA3-205ENST00000465471 BSPRYQ5W0U4 402 aa21.31■■□□□ 1
SKA3-205ENST00000465471 OSCP1Q8WVF1 389 aa21.31■■□□□ 1
SKA3-205ENST00000465471 XPO4Q9C0E2 1151 aaKnown RBP21.31■■□□□ 1
SKA3-205ENST00000465471 DNMT3LQ9UJW3 386 aa21.31■■□□□ 1
SKA3-205ENST00000465471 NUDT5Q9UKK9 219 aa21.31■■□□□ 1
SKA3-205ENST00000465471 FBXL21Q9UKT6 434 aa21.31■■□□□ 1
SKA3-205ENST00000465471 CEP83Q9Y592 693 aa21.31■■□□□ 1
SKA3-205ENST00000465471 FAM86C2PA6NEL3 165 aa21.3■■□□□ 1
SKA3-205ENST00000465471 SHISA7A6NL88 538 aa21.3■■□□□ 1
SKA3-205ENST00000465471 MDM4O15151 490 aa21.3■■□□□ 1
SKA3-205ENST00000465471 SART1O43290 800 aaKnown RBP21.3■■□□□ 1
SKA3-205ENST00000465471 GREM1O60565 184 aa21.3■■□□□ 1
SKA3-205ENST00000465471 MLLT6P55198 1093 aaPredicted RBP21.3■■□□□ 1
SKA3-205ENST00000465471 MLF2Q15773 248 aaPredicted RBP21.3■■□□□ 1
SKA3-205ENST00000465471 PTPN20Q4JDL3 420 aa21.3■■□□□ 1
SKA3-205ENST00000465471 SLC44A4Q53GD3 710 aa21.3■■□□□ 1
SKA3-205ENST00000465471 C10orf120Q5SQS8 335 aa21.3■■□□□ 1
SKA3-205ENST00000465471 SCUBE3Q8IX30 993 aa21.3■■□□□ 1
SKA3-205ENST00000465471 SIX5Q8N196 739 aa21.3■■□□□ 1
SKA3-205ENST00000465471 TMEM35BQ8NCS4 154 aa21.3■■□□□ 1
SKA3-205ENST00000465471 PPP1R13BQ96KQ4 1090 aa21.3■■□□□ 1
SKA3-205ENST00000465471 NOX5Q96PH1 765 aa21.3■■□□□ 1
SKA3-205ENST00000465471 DDX23Q9BUQ8 820 aaKnown RBP21.3■■□□□ 1
SKA3-205ENST00000465471 HPS4Q9NQG7 708 aa21.3■■□□□ 1
SKA3-205ENST00000465471 GKN1Q9NS71 199 aa21.3■■□□□ 1
SKA3-205ENST00000465471 ABCC13Q9NSE7 274 aa21.3■■□□□ 1
SKA3-205ENST00000465471 CFAP97Q9P2B7 532 aa21.3■■□□□ 1
SKA3-205ENST00000465471 CA14Q9ULX7 337 aa21.3■■□□□ 1
SKA3-205ENST00000465471 ITIH6Q6UXX5 1313 aa21.29■■□□□ 1
SKA3-205ENST00000465471 A0A1W2PQJ5 194 aa21.29■■□□□ 1
SKA3-205ENST00000465471 E2F8A0AVK6 867 aa21.29■■□□□ 1
SKA3-205ENST00000465471 LRRC53A6NM62 1247 aa21.29■■□□□ 1
SKA3-205ENST00000465471 PRR33A8MZF0 331 aa21.29■■□□□ 1
SKA3-205ENST00000465471 PDGFBP01127 241 aaPredicted RBP21.29■■□□□ 1
SKA3-205ENST00000465471 LTFP02788 710 aa21.29■■□□□ 1
SKA3-205ENST00000465471 CYP1A1P04798 512 aaPredicted RBP21.29■■□□□ 1
SKA3-205ENST00000465471 FERP16591 822 aa21.29■■□□□ 1
SKA3-205ENST00000465471 STARD6P59095 220 aa21.29■■□□□ 1
SKA3-205ENST00000465471 NOMO3P69849 1222 aa21.29■■□□□ 1
SKA3-205ENST00000465471 PRKCQQ04759 706 aa21.29■■□□□ 1
SKA3-205ENST00000465471 PDGFRLQ15198 375 aa21.29■■□□□ 1
SKA3-205ENST00000465471 EML3Q32P44 896 aa21.29■■□□□ 1
SKA3-205ENST00000465471 BTBD8Q5XKL5 378 aa21.29■■□□□ 1
SKA3-205ENST00000465471 MSANTD2Q6P1R3 559 aa21.29■■□□□ 1
SKA3-205ENST00000465471 BEND5Q7L4P6 421 aa21.29■■□□□ 1
SKA3-205ENST00000465471 IRF2BP2Q7Z5L9 587 aa21.29■■□□□ 1
SKA3-205ENST00000465471 FMNL3Q8IVF7 1028 aa21.29■■□□□ 1
SKA3-205ENST00000465471 OLIG1Q8TAK6 271 aa21.29■■□□□ 1
SKA3-205ENST00000465471 WBP2Q969T9 261 aa21.29■■□□□ 1
SKA3-205ENST00000465471 IQCDQ96DY2 449 aa21.29■■□□□ 1
SKA3-205ENST00000465471 SYT11Q9BT88 431 aa21.29■■□□□ 1
SKA3-205ENST00000465471 NUP58Q9BVL2 599 aa21.29■■□□□ 1
SKA3-205ENST00000465471 NACA2Q9H009 215 aa21.29■■□□□ 1
SKA3-205ENST00000465471 MIS12Q9H081 205 aa21.29■■□□□ 1
SKA3-205ENST00000465471 HEBP1Q9NRV9 189 aa21.29■■□□□ 1
SKA3-205ENST00000465471 OLA1Q9NTK5 396 aaKnown RBP21.29■■□□□ 1
SKA3-205ENST00000465471 ERBB2P04626 1255 aa21.28■■□□□ 1
SKA3-205ENST00000465471 FYNP06241 537 aa21.28■■□□□ 1
SKA3-205ENST00000465471 GABRB2P47870 512 aa21.28■■□□□ 1
SKA3-205ENST00000465471 TNK2Q07912 1038 aa21.28■■□□□ 1
SKA3-205ENST00000465471 TMEM31Q5JXX7 168 aa21.28■■□□□ 1
SKA3-205ENST00000465471 E4F1Q66K89 784 aaPredicted RBP21.28■■□□□ 1
SKA3-205ENST00000465471 TRIM68Q6AZZ1 485 aa21.28■■□□□ 1
SKA3-205ENST00000465471 CC2D1AQ6P1N0 951 aaPredicted RBP21.28■■□□□ 1
SKA3-205ENST00000465471 OLFML1Q6UWY5 402 aa21.28■■□□□ 1
SKA3-205ENST00000465471 PIWIL1Q96J94 861 aaKnown RBP21.28■■□□□ 1
SKA3-205ENST00000465471 DUS2Q9NX74 493 aaKnown RBP21.28■■□□□ 1
SKA3-205ENST00000465471 GTSE1Q9NYZ3 720 aa21.28■■□□□ 1
SKA3-205ENST00000465471 AIPL1Q9NZN9 384 aa21.28■■□□□ 1
SKA3-205ENST00000465471 WNT6Q9Y6F9 365 aa21.28■■□□□ 1
SKA3-205ENST00000465471 F5P12259 2224 aa21.27■■□□□ 1
SKA3-205ENST00000465471 OTOL1A6NHN0 477 aaPredicted RBP21.27■■□□□ 1
SKA3-205ENST00000465471 CBFA2T2O43439 604 aa21.27■■□□□ 1
SKA3-205ENST00000465471 TPM3P06753 285 aa21.27■■□□□ 1
SKA3-205ENST00000465471 GLULP15104 373 aa21.27■■□□□ 1
SKA3-205ENST00000465471 ARSAP15289 507 aa21.27■■□□□ 1
SKA3-205ENST00000465471 ARID5AQ03989 594 aa21.27■■□□□ 1
SKA3-205ENST00000465471 EFEMP1Q12805 493 aa21.27■■□□□ 1
SKA3-205ENST00000465471 CWF19L1Q69YN2 538 aaKnown RBP21.27■■□□□ 1
SKA3-205ENST00000465471 SARM1Q6SZW1 724 aa21.27■■□□□ 1
SKA3-205ENST00000465471 TRIM72Q6ZMU5 477 aa21.27■■□□□ 1
SKA3-205ENST00000465471 HTR3DQ70Z44 454 aa21.27■■□□□ 1
SKA3-205ENST00000465471 GAS2L3Q86XJ1 694 aa21.27■■□□□ 1
SKA3-205ENST00000465471 EDEM1Q92611 657 aa21.27■■□□□ 1
SKA3-205ENST00000465471 PCDHB18PQ96TA0 734 aa21.27■■□□□ 1
SKA3-205ENST00000465471 PDCL3Q9H2J4 239 aa21.27■■□□□ 1
SKA3-205ENST00000465471 ASNSD1Q9NWL6 643 aa21.27■■□□□ 1
SKA3-205ENST00000465471 MARCH2Q9P0N8 246 aa21.27■■□□□ 1
SKA3-205ENST00000465471 ZDBF2Q9HCK1 2354 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 STC2O76061 302 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 CCDC172P0C7W6 258 aa21.26■□□□□ 0.99
SKA3-205ENST00000465471 UNGP13051 313 aaPredicted RBP21.26■□□□□ 0.99
SKA3-205ENST00000465471 PRKCIP41743 596 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms