RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SYNCQ9H7C4 482 aa17.77■□□□□ 0.44
USP39-211ENST00000465282 CCSER2Q9H7U1 834 aa17.77■□□□□ 0.44
USP39-211ENST00000465282 SLC2A4RGQ9NR83 387 aa17.77■□□□□ 0.44
USP39-211ENST00000465282 ASNSD1Q9NWL6 643 aa17.77■□□□□ 0.44
USP39-211ENST00000465282 OSER1Q9NX31 292 aa17.77■□□□□ 0.44
USP39-211ENST00000465282 DUSP12Q9UNI6 340 aa17.77■□□□□ 0.44
USP39-211ENST00000465282 YJEFN3A6XGL0 299 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 E7ENQ6 273 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 TNFRSF10AO00220 468 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 PAPSS1O43252 624 aaPredicted RBP17.76■□□□□ 0.43
USP39-211ENST00000465282 AP5Z1O43299 807 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 DCXO43602 365 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 LTFP02788 710 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 MBL2P11226 248 aaPredicted RBP17.76■□□□□ 0.43
USP39-211ENST00000465282 TNFAIP3P21580 790 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 HNRNPH3P31942 346 aaKnown RBP17.76■□□□□ 0.43
USP39-211ENST00000465282 CASP14P31944 242 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 SCNN1AP37088 669 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 PGFP49763 221 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 PFKPQ01813 784 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 GOLGA8FQ08AF8 430 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 GOLGA8DPQ0D2H9 430 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 TSR1Q2NL82 804 aaKnown RBP17.76■□□□□ 0.43
USP39-211ENST00000465282 ARHGAP29Q52LW3 1261 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 TOGARAM2Q6ZUX3 1019 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 RSRC2Q7L4I2 434 aaKnown RBP17.76■□□□□ 0.43
USP39-211ENST00000465282 YAF2Q8IY57 180 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 SYT11Q9BT88 431 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 RPP25Q9BUL9 199 aaKnown RBP17.76■□□□□ 0.43
USP39-211ENST00000465282 TRPV5Q9NQA5 729 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 MUTYHQ9UIF7 546 aa17.76■□□□□ 0.43
USP39-211ENST00000465282 PIK3R2O00459 728 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 CHADO15335 359 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 SERPING1P05155 500 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 UNGP13051 313 aaPredicted RBP17.75■□□□□ 0.43
USP39-211ENST00000465282 ZNF75DP51815 510 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 YWHAZP63104 245 aaKnown RBP17.75■□□□□ 0.43
USP39-211ENST00000465282 COG7P83436 770 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 CENPCQ03188 943 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 ARID5BQ14865 1188 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 CLEC16AQ2KHT3 1053 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 PTPN20Q4JDL3 420 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 C10orf120Q5SQS8 335 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 NAA35Q5VZE5 725 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 CC2D1AQ6P1N0 951 aaPredicted RBP17.75■□□□□ 0.43
USP39-211ENST00000465282 VPS36Q86VN1 386 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 OR8K1Q8NGG5 319 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 RNF139Q8WU17 664 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 IRF7Q92985 503 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 PLA2G2FQ9BZM2 168 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 HAUS4Q9H6D7 363 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 STRIP2Q9ULQ0 834 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 CCL26Q9Y258 94 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 CPQQ9Y646 472 aa17.75■□□□□ 0.43
USP39-211ENST00000465282 ZNF263O14978 683 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 GZMAP12544 262 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 MMP8P22894 467 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 NSFP46459 744 aaKnown RBP17.74■□□□□ 0.43
USP39-211ENST00000465282 KPNA1P52294 538 aaPredicted RBP17.74■□□□□ 0.43
USP39-211ENST00000465282 ZXDAP98168 799 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 SLC6A3Q01959 620 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 USP4Q13107 963 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 ZNF77Q15935 545 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 MSANTD2Q6P1R3 559 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 SLC26A9Q7LBE3 791 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 PHF13Q86YI8 300 aaPredicted RBP17.74■□□□□ 0.43
USP39-211ENST00000465282 CNGA4Q8IV77 575 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 SH3RF2Q8TEC5 729 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 CPA5Q8WXQ8 436 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 NDRG1Q92597 394 aaKnown RBP17.74■□□□□ 0.43
USP39-211ENST00000465282 EDAQ92838 391 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 DNASE1L2Q92874 299 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 RSPRY1Q96DX4 576 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 DNAJC7Q99615 494 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 SMG9Q9H0W8 520 aaKnown RBP17.74■□□□□ 0.43
USP39-211ENST00000465282 POPDC2Q9HBU9 364 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 TMEM51Q9NW97 253 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 ZNHIT6Q9NWK9 470 aaKnown RBP17.74■□□□□ 0.43
USP39-211ENST00000465282 WDR35Q9P2L0 1181 aa17.74■□□□□ 0.43
USP39-211ENST00000465282 E2F8A0AVK6 867 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 PI4K2BG5E9Z4 385 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 LEFTY2O00292 366 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 SLC9A3R1O14745 358 aaPredicted RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 HSF2BPO75031 334 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 TBX18O95935 607 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 ERBB2P04626 1255 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 GDI1P31150 447 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 MLLT6P55198 1093 aaPredicted RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 TBX2Q13207 712 aaPredicted RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 MTF1Q14872 753 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 E4F1Q66K89 784 aaPredicted RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 HGSNATQ68CP4 663 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 OR6B2Q6IFH4 312 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 ARCQ7LC44 396 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 CLEC4CQ8WTT0 213 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 FAM149B1Q96BN6 582 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 VCPIP1Q96JH7 1222 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 ZFRQ96KR1 1074 aaKnown RBP17.73■□□□□ 0.43
USP39-211ENST00000465282 LRRC3BQ96PB8 259 aa17.73■□□□□ 0.43
USP39-211ENST00000465282 PCDHB18PQ96TA0 734 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms