RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 NKX6-1P78426 367 aaPredicted RBP5.35□□□□□ -1.55
UBR4-209ENST00000465036 IRF2BP2Q7Z5L9 587 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 EXOC8Q8IYI6 725 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 NSMCE1Q8WV22 266 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 RSPRY1Q96DX4 576 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 MTMR8Q96EF0 704 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 MTMR4Q9NYA4 1195 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 PCDHA1Q9Y5I3 950 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
UBR4-209ENST00000465036 DLC1Q96QB1 1528 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 JCADQ9P266 1359 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 CNTNAP2Q9UHC6 1331 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 LY6G6EA0A0G2JKS1 128 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 TCRBV5S1A1TA0A578 114 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 FAM90A10PA6NDY2 464 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 BTBD19C9JJ37 291 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 A1BGP04217 495 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 POU2F2P09086 479 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 PDE6CP51160 858 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 SATB1Q01826 763 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 EXOSC9Q06265 439 aaKnown RBP5.34□□□□□ -1.55
UBR4-209ENST00000465036 SRSF1Q07955 248 aaKnown RBP eCLIP5.34□□□□□ -1.55
UBR4-209ENST00000465036 MIDNQ504T8 468 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 C4orf46Q504U0 113 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 NRACQ8N912 160 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.34□□□□□ -1.55
UBR4-209ENST00000465036 XAGE5Q8WWM1 108 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 PRDM16Q9HAZ2 1276 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 LRP12Q9Y561 859 aa5.34□□□□□ -1.55
UBR4-209ENST00000465036 ARHGEF28Q8N1W1 1705 aaKnown RBP5.34□□□□□ -1.56
UBR4-209ENST00000465036 FMN2Q9NZ56 1722 aa5.34□□□□□ -1.56
UBR4-209ENST00000465036 USP32Q8NFA0 1604 aa5.34□□□□□ -1.56
UBR4-209ENST00000465036 PXDNQ92626 1479 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 EXOC3O60645 756 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 UNC5CO95185 931 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 OAZ2O95190 189 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 MAP4K4O95819 1239 aaPredicted RBP5.33□□□□□ -1.56
UBR4-209ENST00000465036 CSF1RP07333 972 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 HDCP19113 662 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 CCND1P24385 295 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 RENBPP51606 427 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 WNT3P56703 355 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 PLS1Q14651 629 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 ADAMTS18Q8TE60 1221 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 MARK4Q96L34 752 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 FYTTD1Q96QD9 318 aaKnown RBP5.33□□□□□ -1.56
UBR4-209ENST00000465036 PCDH12Q9NPG4 1184 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 TFCP2L1Q9NZI6 479 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 CHPF2Q9P2E5 772 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 KLHL13Q9P2N7 655 aa5.33□□□□□ -1.56
UBR4-209ENST00000465036 CCNL1Q9UK58 526 aaPredicted RBP5.33□□□□□ -1.56
UBR4-209ENST00000465036 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
UBR4-209ENST00000465036 PNPLA6Q8IY17 1366 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 DSCR3O14972 297 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 PEX14O75381 377 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 KATNA1O75449 491 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 THP07101 528 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 GRPP07492 148 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 XRCC6P12956 609 aaKnown RBP eCLIP5.32□□□□□ -1.56
UBR4-209ENST00000465036 SOX8P57073 446 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 LRRC41Q15345 812 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 PGS1Q32NB8 556 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 TMEM240Q5SV17 173 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 TMEM63BQ5T3F8 832 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 SHC4Q6S5L8 630 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 MESP1Q9BRJ9 268 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 CIPCQ9C0C6 399 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 XPR1Q9UBH6 696 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 MED16Q9Y2X0 877 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 ADGRB2O60241 1585 aa5.32□□□□□ -1.56
UBR4-209ENST00000465036 KIAA1210Q9ULL0 1709 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 SHPRHQ149N8 1683 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 TRPM1Q7Z4N2 1603 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 PDE8BO95263 885 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 CDKN1CP49918 316 aaPredicted RBP5.31□□□□□ -1.56
UBR4-209ENST00000465036 MYO1EQ12965 1108 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 RBMS2Q15434 407 aaKnown RBP5.31□□□□□ -1.56
UBR4-209ENST00000465036 CYP1B1Q16678 543 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 FAM187BQ17R55 369 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 PLEKHG6Q3KR16 790 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 RNASE12Q5GAN4 147 aaKnown RBP5.31□□□□□ -1.56
UBR4-209ENST00000465036 L1TD1Q5T7N2 865 aaKnown RBP5.31□□□□□ -1.56
UBR4-209ENST00000465036 SERPINA13PQ6UXR4 307 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 DEF8Q6ZN54 512 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 KRT28Q7Z3Y7 464 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 BCDIN3DQ7Z5W3 292 aaKnown RBP5.31□□□□□ -1.56
UBR4-209ENST00000465036 SLC15A3Q8IY34 581 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 MORC4Q8TE76 937 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 OSCP1Q8WVF1 389 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 CUL5Q93034 780 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 LRRC59Q96AG4 307 aaKnown RBP5.31□□□□□ -1.56
UBR4-209ENST00000465036 SLC35A4Q96G79 324 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 CDK19Q9BWU1 502 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 ATP7BP35670 1465 aa5.31□□□□□ -1.56
UBR4-209ENST00000465036 TONSLQ96HA7 1378 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms