RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 PCDHB6Q9Y5E3 794 aa12.14□□□□□ -0.47
SCAF8-205ENST00000464628 CREBBPQ92793 2442 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 LRBAP50851 2863 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 ARID1BQ8NFD5 2236 aaPredicted RBP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 LAD1O00515 517 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 HCRTO43612 131 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 CACNG3O60359 315 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 GABREP78334 506 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 ORC1Q13415 861 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 ENPP2Q13822 863 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 ANO4Q32M45 955 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 PRAMEF14Q5SWL7 426 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 OSTM1Q86WC4 334 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 TMPRSS6Q8IU80 811 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 SCN4BQ8IWT1 228 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 EID2Q8N6I1 236 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 TMEM161BQ8NDZ6 487 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 WBP2Q969T9 261 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 FUBP3Q96I24 572 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 VCPIP1Q96JH7 1222 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 SPATA17Q96L03 361 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 JAKMIP1Q96N16 626 aaKnown RBP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 ELF4Q99607 663 aaPredicted RBP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 ACBD6Q9BR61 282 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 DDX43Q9NXZ2 648 aaKnown RBP12.13□□□□□ -0.47
SCAF8-205ENST00000464628 L1RE1Q9UN81 338 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 STON1Q9Y6Q2 735 aa12.13□□□□□ -0.47
SCAF8-205ENST00000464628 KPNA7A9QM74 516 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 DFNA5O60443 496 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 MT-CO3P00414 261 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 MBL2P11226 248 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-205ENST00000464628 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-205ENST00000464628 MUTP22033 750 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-205ENST00000464628 ACSL1P33121 698 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 MAGEA11P43364 429 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 STRN3Q13033 797 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 STARD3Q14849 445 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 TMEM132DQ14C87 1099 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 SFMBT2Q5VUG0 894 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 DENND5BQ6ZUT9 1274 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 CACUL1Q86Y37 369 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 LSMEM2Q8N112 164 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 SCFD1Q8WVM8 642 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 KCNB2Q92953 911 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 BIRC7Q96CA5 298 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 SIPA1Q96FS4 1042 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
SCAF8-205ENST00000464628 SEPT3Q9UH03 358 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 ADAMTS1Q9UHI8 967 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
SCAF8-205ENST00000464628 DERAQ9Y315 318 aa12.12□□□□□ -0.47
SCAF8-205ENST00000464628 C2CD3Q4AC94 2353 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 BLACEA4D250 179 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 TSPAN3O60637 253 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 ITGAVP06756 1048 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 ACP1P24666 158 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 MATR3P43243 847 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■□□ 15.9
SCAF8-205ENST00000464628 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
SCAF8-205ENST00000464628 KANSL1Q7Z3B3 1105 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 FAM124AQ86V42 546 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 SPATA2LQ8IUW3 424 aaPredicted RBP12.11□□□□□ -0.47
SCAF8-205ENST00000464628 CD302Q8IX05 232 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 PRCCQ92733 491 aaPredicted RBP12.11□□□□□ -0.47
SCAF8-205ENST00000464628 RUSC1Q9BVN2 902 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 C17orf75Q9HAS0 396 aa12.11□□□□□ -0.47
SCAF8-205ENST00000464628 CPLX1O14810 134 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 VILLO15195 856 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 OGTO15294 1046 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 WNT1P04628 370 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CKMT2P17540 419 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CD27P26842 260 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CDC25AP30304 524 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 LSSP48449 732 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 PPP3CCP48454 512 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 ZNF132P52740 706 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 KYAT1Q16773 422 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 ARL13BQ3SXY8 428 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 SV2CQ496J9 727 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CDCP2Q5VXM1 449 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 FAM171BQ6P995 826 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 IGF2-ASQ6U949 168 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CCDC81Q6ZN84 652 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 ERMNQ8TAM6 284 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 P2RY11Q96G91 374 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 CEP295NLQ96MC4 621 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 MARK1Q9P0L2 795 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 C2CD2Q9Y426 696 aa12.1□□□□□ -0.47
SCAF8-205ENST00000464628 NYNRINQ9P2P1 1898 aaKnown RBP12.1□□□□□ -0.47
SCAF8-205ENST00000464628 SFI1A8K8P3 1242 aa12.09□□□□□ -0.47
SCAF8-205ENST00000464628 NEDD8-MDP1E9PL57 170 aa12.09□□□□□ -0.47
SCAF8-205ENST00000464628 GREM1O60565 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms