RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 EEF1DP29692 281 aaKnown RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 TUBP50607 506 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 MTA1Q13330 715 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 CACUL1Q86Y37 369 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 KLRG1Q96E93 195 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 SERPINB11Q96P15 392 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 FTHL17Q9BXU8 183 aa13.24□□□□□ -0.29
NUP58-206ENST00000463407 IARS2Q9NSE4 1012 aaKnown RBP13.24□□□□□ -0.29
NUP58-206ENST00000463407 OTUD4Q01804 1114 aaKnown RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ATP13A1Q9HD20 1204 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 GRID1Q9ULK0 1009 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 AURKCQ9UQB9 309 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 SPACA6W5XKT8 324 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ERVK-10P10266 1014 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 IL10P22301 178 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 TP53BP2Q13625 1128 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 RETSATQ6NUM9 610 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 TPGS1Q6ZTW0 290 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ZNF571Q7Z3V5 609 aaPredicted RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 ANKRD23Q86SG2 305 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 MYO1HQ8N1T3 1032 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 TMEM86AQ8N2M4 240 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 SGF29Q96ES7 293 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 APOL2Q9BQE5 337 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 CARD9Q9H257 536 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ARL2BPQ9Y2Y0 163 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 FRMPD4Q14CM0 1322 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 LRRIQ3A6PVS8 624 aaPredicted RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 USP17L7P0C7H9 530 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ALOX15P16050 662 aaPredicted RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ZC3H12BQ5HYM0 836 aaKnown RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 BRSK2Q8IWQ3 736 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 CD99L2Q8TCZ2 262 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 KCNV2Q8TDN2 545 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 FAM136AQ96C01 138 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 TMA16Q96EY4 203 aaKnown RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 EPN3Q9H201 632 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 FAM32AQ9Y421 112 aaKnown RBP13.23□□□□□ -0.29
NUP58-206ENST00000463407 RAMP2O60895 175 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 CREMQ03060 361 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 LVRNQ6Q4G3 990 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 SPOCD1Q6ZMY3 1216 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 HIC1Q14526 733 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 AGAP9Q5VTM2 703 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ARHGEF19Q8IW93 802 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ADAM32Q8TC27 787 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 C17orf80Q9BSJ5 609 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 TMEM161AQ9NX61 479 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 CAMTA1Q9Y6Y1 1673 aa13.23□□□□□ -0.29
NUP58-206ENST00000463407 ANKRD63C9JTQ0 380 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 HMGCRP04035 888 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 RIBC1Q8N443 379 aaPredicted RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 LPPQ93052 612 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 FRMD8Q9BZ67 464 aaPredicted RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 MAN1C1Q9NR34 630 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 RRN3Q9NYV6 651 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 UBP1Q9NZI7 540 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 DUSP10Q9Y6W6 482 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 CYTH3O43739 400 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 POLR2EP19388 210 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 MSH3P20585 1137 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 ACOX1Q15067 660 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 SCUBE3Q8IX30 993 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 MAGEB10Q96LZ2 347 aaPredicted RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 PRPF18Q99633 342 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 CCDC90BQ9GZT6 254 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 FBXO10Q9UK96 956 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 RUVBL2Q9Y230 463 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 DYRK1BQ9Y463 629 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 SDR42E2A6NKP2 422 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 GZMAP12544 262 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 CD52P31358 61 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 DDX39BQ13838 428 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 SKA1Q96BD8 255 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 SGSM3Q96HU1 749 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 CORO1BQ9BR76 489 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 TMEM134Q9H6X4 195 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 MARC1Q5VT66 337 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.296e-8■■■■■ 33.4
NUP58-206ENST00000463407 PGM1P36871 562 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms