RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RPL6Q02878 288 aaKnown RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 DNM1Q05193 864 aaKnown RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 SGSM1Q2NKQ1 1148 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 SCARA5Q6ZMJ2 495 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 HTR3DQ70Z44 454 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 ACOT1Q86TX2 421 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 CRYBG2Q8N1P7 616 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 ZMIZ2Q8NF64 920 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 WBP2Q969T9 261 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 XPO6Q96QU8 1125 aaKnown RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 SMOQ99835 787 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 SCNM1Q9BWG6 230 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 SDCBP2Q9H190 292 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 CSNK1G1Q9HCP0 422 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 TLR8Q9NR97 1041 aaKnown RBP20.92■□□□□ 0.94
VARS-221ENST00000463184 SLC6A14Q9UN76 642 aa20.92■□□□□ 0.94
VARS-221ENST00000463184 UPK3BL1B0FP48 263 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 UPK3BL2E5RIL1 263 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 TLR5O60602 858 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 RPN1P04843 607 aaKnown RBP20.91■□□□□ 0.94
VARS-221ENST00000463184 IRF1P10914 325 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 PI4KAP42356 2102 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 ATXN3P54252 364 aaPredicted RBP20.91■□□□□ 0.94
VARS-221ENST00000463184 CUL4BQ13620 913 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 GRAMD4Q6IC98 578 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 SDE2Q6IQ49 451 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 RABEPKQ7Z6M1 372 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 CHD6Q8TD26 2715 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 TMEM174Q8WUU8 243 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 TMEM121BQ9BXQ6 578 aaPredicted RBP20.91■□□□□ 0.94
VARS-221ENST00000463184 FAM13BQ9NYF5 915 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 HCN2Q9UL51 889 aa20.91■□□□□ 0.94
VARS-221ENST00000463184 TNRC6BQ9UPQ9 1833 aaKnown RBP20.91■□□□□ 0.94
VARS-221ENST00000463184 ATXN2Q99700 1313 aaKnown RBP20.9■□□□□ 0.94
VARS-221ENST00000463184 ZNF217O75362 1048 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 BEST1O76090 585 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 VNN1O95497 513 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 TOP3BO95985 862 aaKnown RBP20.9■□□□□ 0.94
VARS-221ENST00000463184 CFIP05156 583 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 AFMP43652 599 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 GFPT1Q06210 699 aaPredicted RBP20.9■□□□□ 0.94
VARS-221ENST00000463184 GOLGA8FQ08AF8 430 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 GOLGA8DPQ0D2H9 430 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 UNC93AQ86WB7 457 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 SLC9A9Q8IVB4 645 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 HDDC3Q8N4P3 179 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 SLC2A14Q8TDB8 520 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 TAF4BQ92750 862 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 IPO9Q96P70 1041 aaKnown RBP20.9■□□□□ 0.94
VARS-221ENST00000463184 KLF16Q9BXK1 252 aaPredicted RBP20.9■□□□□ 0.94
VARS-221ENST00000463184 DNAJC17Q9NVM6 304 aaKnown RBP20.9■□□□□ 0.94
VARS-221ENST00000463184 DMAC2Q9NW81 257 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 CALCOCO1Q9P1Z2 691 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 WDR35Q9P2L0 1181 aa20.9■□□□□ 0.94
VARS-221ENST00000463184 PCNX2A6NKB5 2137 aa20.89■□□□□ 0.94
VARS-221ENST00000463184 A0A1W2PQF6 199 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 TRIM24O15164 1050 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 CACNG3O60359 315 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 GREM1O60565 184 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 SERPINF2P08697 491 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 CCDC130P13994 396 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 TRIM21P19474 475 aaKnown RBP20.89■□□□□ 0.93
VARS-221ENST00000463184 ATP5C1P36542 298 aaKnown RBP20.89■□□□□ 0.93
VARS-221ENST00000463184 PGFP49763 221 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 NDST1P52848 882 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 MAP3K7CLP57077 242 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 KRT85P78386 507 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 ZNF33AQ06730 810 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 SEMA3BQ13214 749 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 PIP4P1Q86T03 277 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 MIB1Q86YT6 1006 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 GATA6Q92908 595 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 ELMO3Q96BJ8 720 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 BBS2Q9BXC9 721 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 CYLDQ9NQC7 956 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 MARK1Q9P0L2 795 aa20.89■□□□□ 0.93
VARS-221ENST00000463184 LSM7Q9UK45 103 aaKnown RBP20.89■□□□□ 0.93
VARS-221ENST00000463184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.88■□□□□ 0.93
VARS-221ENST00000463184 NEDD8-MDP1E9PL57 170 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 TBX18O95935 607 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 TYRP14679 529 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 WASP42768 502 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 ZACNQ401N2 412 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 EGFLAMQ63HQ2 1017 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 CEP57L1Q8IYX8 460 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 CHPFQ8IZ52 775 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 DEFB119Q8N690 84 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 IPO4Q8TEX9 1081 aaKnown RBP20.88■□□□□ 0.93
VARS-221ENST00000463184 CAPN10Q9HC96 672 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.88■□□□□ 0.93
VARS-221ENST00000463184 CHMP5Q9NZZ3 219 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 RCOR1Q9UKL0 485 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 PCDHA7Q9UN72 937 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 SCML2Q9UQR0 700 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 NEUROG3Q9Y4Z2 214 aa20.88■□□□□ 0.93
VARS-221ENST00000463184 IGHV1OR15-9A0A0B4J2B8 117 aa20.87■□□□□ 0.93
VARS-221ENST00000463184 IKBKBO14920 756 aa20.87■□□□□ 0.93
VARS-221ENST00000463184 OPHN1O60890 802 aa20.87■□□□□ 0.93
VARS-221ENST00000463184 FAM200BP0CF97 657 aa20.87■□□□□ 0.93
VARS-221ENST00000463184 RDXP35241 583 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms