RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 BLZF1Q9H2G9 400 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 KCTD10Q9H3F6 313 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 UNC45AQ9H3U1 944 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 TBC1D22BQ9NU19 505 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 MORF4L1Q9UBU8 362 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 ADD3Q9UEY8 706 aaKnown RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 MAN1B1Q9UKM7 699 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 NUMBLQ9Y6R0 609 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 A0A0G2JMZ2 1700 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 B4DLN1 442 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 DDX39AO00148 427 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 CHMP2AO43633 222 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 PRICKLE3O43900 615 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 RPN1P04843 607 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 MYL1P05976 194 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 PGK2P07205 417 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 HOXA5P20719 270 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 ENPP1P22413 925 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 RPA1P27694 616 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 GPR3P46089 330 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 LGALS4P56470 323 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 ITGB3BPQ13352 177 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 MORC3Q14149 939 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 DHX8Q14562 1220 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 DPCR1Q3MIW9 517 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 BRDTQ58F21 947 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 AGBL4Q5VU57 503 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 B3GNT9Q6UX72 402 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 KCNK18Q7Z418 384 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 FAM133AQ8N9E0 248 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 TRIML1Q8N9V2 468 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 GAB3Q8WWW8 586 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 LARP4BQ92615 738 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 RAD54LQ92698 747 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 CDHR1Q96JP9 859 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 HIST1H2AHQ96KK5 128 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 MPHOSPH6Q99547 160 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 HIST1H2AJQ99878 128 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 C7orf25Q9BPX7 421 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 POLR3CQ9BUI4 534 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 LRRC27Q9C0I9 530 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 PORCNQ9H237 461 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 ZCCHC17Q9NP64 241 aaKnown RBP8.07□□□□□ -1.12
UBE4B-204ENST00000462658 BLOC1S4Q9NUP1 217 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 PRSS50Q9UI38 385 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 BRCA2P51587 3418 aa8.07□□□□□ -1.12
UBE4B-204ENST00000462658 ASTN1O14525 1302 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 CENPFP49454 3210 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 E9PMD0 336 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 STRNO43815 780 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 ATP9AO75110 1047 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 SLITRK3O94933 977 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 CNOT4O95628 575 aaKnown RBP8.06□□□□□ -1.12
UBE4B-204ENST00000462658 PLA2G4BP0C869 781 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 MUTP22033 750 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 EDNRBP24530 442 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 MAP2K2P36507 400 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 LBX1P52954 281 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 CYP4A11Q02928 519 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 KLF1Q13351 362 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-204ENST00000462658 ACAP1Q15027 740 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 IQCB1Q15051 598 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBE4B-204ENST00000462658 FAM110CQ1W6H9 321 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 ZMAT1Q5H9K5 638 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 KLHDC10Q6PID8 442 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 GAREM2Q75VX8 874 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 MIER3Q7Z3K6 550 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 LUZP1Q86V48 1076 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 SLC41A1Q8IVJ1 513 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 TPH2Q8IWU9 490 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 CBARPQ8N350 705 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-204ENST00000462658 CDYL2Q8N8U2 506 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 MLKLQ8NB16 471 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 OR14K1Q8NGZ2 314 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 WDR92Q96MX6 357 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 HSD17B14Q9BPX1 270 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 TRIM9Q9C026 710 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 TUFT1Q9NNX1 390 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 RMND1Q9NWS8 449 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 RGL1Q9NZL6 768 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 TCEAL9Q9UHQ7 104 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-204ENST00000462658 DNM3Q9UQ16 869 aa8.06□□□□□ -1.12
UBE4B-204ENST00000462658 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 MYMKA6NI61 221 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 ASB14A6NK59 587 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 SMTNL1A8MU46 457 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 BECN2A8MW95 431 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 GOLGA6L19H0YKK7 550 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 K7ESF4 209 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 KLRC4O43908 158 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 MT-CO1P00395 513 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 KCNA2P16389 499 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 MAPK4P31152 587 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 ICAM3P32942 547 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 JAK3P52333 1124 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms