RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 STRN3Q13033 797 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 NNTQ13423 1086 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 PRPF4BQ13523 1007 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 CUL4BQ13620 913 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 HNRNPDQ14103 355 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 PCBP1Q15365 356 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 TRIP6Q15654 476 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 PDCD2Q16342 344 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 ZSCAN26Q16670 478 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 TRIM61Q5EBN2 209 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 CYP4A22Q5TCH4 519 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 CDCA2Q69YH5 1023 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 MMS22LQ6ZRQ5 1243 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 HAUS6Q7Z4H7 955 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 SFR1Q86XK3 245 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 GRAMD1CQ8IYS0 662 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 C17orf53Q8N3J3 647 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 HDDC3Q8N4P3 179 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 GOLGA5Q8TBA6 731 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 ZSCAN18Q8TBC5 510 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 PIP4K2CQ8TBX8 421 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 CCDC47Q96A33 483 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 E2F7Q96AV8 911 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 DNAJC19Q96DA6 116 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 HHIPQ96QV1 700 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 C7orf25Q9BPX7 421 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 NTPCRQ9BSD7 190 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 TRIM9Q9C026 710 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 MINDY3Q9H8M7 445 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 TRPV4Q9HBA0 871 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 AGPAT5Q9NUQ2 364 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 SNTG2Q9NY99 539 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 GTSE1Q9NYZ3 720 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 TBC1D7Q9P0N9 293 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 DKK4Q9UBT3 224 aa6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 EVLQ9UI08 416 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 MBD1Q9UIS9 605 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-204ENST00000462198 PHLPP2Q6ZVD8 1323 aa6.4□□□□□ -1.39
SMARCC1-204ENST00000462198 MYO9AB2RTY4 2548 aa6.4□□□□□ -1.39
SMARCC1-204ENST00000462198 KNTC1P50748 2209 aa6.4□□□□□ -1.39
SMARCC1-204ENST00000462198 SPTAN1Q13813 2472 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PVALEFA0A1B0GWK0 134 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 TRABD2BA6NFA1 517 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 TMCO5BA8MYB1 307 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 B4GALT5O43286 388 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 TSPAN1O60635 241 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 GCNT3O95395 438 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 LRG1P02750 347 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 NTRK1P04629 796 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PRKCBP05771 671 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 MAPTP10636 758 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 GJA1P17302 382 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 SCP2P22307 547 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 CASP1P29466 404 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 ABCD1P33897 745 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 ABCG1P45844 678 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 CD151P48509 253 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 DHPSP49366 369 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 DGKEP52429 567 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 NCKAP1LP55160 1127 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PNOCQ13519 176 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 POSTNQ15063 836 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 USP39Q53GS9 565 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 HSP90B2PQ58FF3 399 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 AP1ARQ63HQ0 302 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PMS2CLQ68D20 193 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 SARM1Q6SZW1 724 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 STXBP4Q6ZWJ1 553 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 UNC13DQ70J99 1090 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PDZD4Q76G19 769 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 APBB1IPQ7Z5R6 666 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 SVOPQ8N4V2 548 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 TTC16Q8NEE8 873 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 ENGASEQ8NFI3 743 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 HASPINQ8TF76 798 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 RSPRY1Q96DX4 576 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 BICD1Q96G01 975 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 MRFAP1L1Q96HT8 127 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 CPB2Q96IY4 423 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 TMEM209Q96SK2 561 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PAAF1Q9BRP4 392 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 KLF16Q9BXK1 252 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 CCDC113Q9H0I3 377 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 FZD8Q9H461 694 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PRORYQ9H606 182 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 EXOC1Q9NV70 894 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PRMT7Q9NVM4 692 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 PSD3Q9NYI0 1048 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 ARHGAP28Q9P2N2 729 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 CACNG4Q9UBN1 327 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 SEL1LQ9UBV2 794 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 EBF1Q9UH73 591 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 HES2Q9Y543 173 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 IPPQ9Y573 584 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 COL12A1Q99715 3063 aa6.39□□□□□ -1.39
SMARCC1-204ENST00000462198 NCANO14594 1321 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms