RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 GPRASP1Q5JY77 1395 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 EGFLAMQ63HQ2 1017 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 CATIPQ7Z7H3 387 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 ZNF548Q8NEK5 533 aaPredicted RBP5.1□□□□□ -1.59
CFHR3-204ENST00000461558 NEURL4Q96JN8 1562 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 HIPK2Q9H2X6 1198 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 TRAPPC8Q9Y2L5 1435 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 MED16Q9Y2X0 877 aa5.1□□□□□ -1.59
CFHR3-204ENST00000461558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.1□□□□□ -1.59
CFHR3-204ENST00000461558 KIDINS220Q9ULH0 1771 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 ATP7AQ04656 1500 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 CCDC144AA2RUR9 1427 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 CES2O00748 559 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 CNOT3O75175 753 aaKnown RBP5.09□□□□□ -1.59
CFHR3-204ENST00000461558 GKP32189 559 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 ME1P48163 572 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 SUMO2P61956 95 aaKnown RBP5.09□□□□□ -1.59
CFHR3-204ENST00000461558 CFHR1Q03591 330 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 PIM3Q86V86 326 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 RBMXL3Q8N7X1 1067 aaKnown RBP5.09□□□□□ -1.59
CFHR3-204ENST00000461558 CDK5RAP3Q96JB5 506 aa5.09□□□□□ -1.59
CFHR3-204ENST00000461558 KIF1BO60333 1816 aa5.09□□□□□ -1.6
CFHR3-204ENST00000461558 MYOM1P52179 1685 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 WDR7Q9Y4E6 1490 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 ZBED9Q6R2W3 1325 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 B4DGG1 531 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 MYO1CO00159 1063 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 PMPCBO75439 489 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 XRCC6P12956 609 aaKnown RBP eCLIP5.08□□□□□ -1.6
CFHR3-204ENST00000461558 PRKAG1P54619 331 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 LMAN2Q12907 356 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 LARS2Q15031 903 aaKnown RBP5.08□□□□□ -1.6
CFHR3-204ENST00000461558 MLC1Q15049 377 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 SEC23BQ15437 767 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 TMTC4Q5T4D3 741 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 ANO7Q6IWH7 933 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 GAS2L3Q86XJ1 694 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 ANKRD13BQ86YJ7 626 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 LIX1LQ8IVB5 337 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 ARFGAP1Q8N6T3 406 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 TMEM171Q8WVE6 324 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 MTFMTQ96DP5 389 aaKnown RBP5.08□□□□□ -1.6
CFHR3-204ENST00000461558 C17orf80Q9BSJ5 609 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 GTPBP4Q9BZE4 634 aaKnown RBP5.08□□□□□ -1.6
CFHR3-204ENST00000461558 FAM234AQ9H0X4 552 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 MROH2AA6NES4 1674 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 CFAP74Q9C0B2 1584 aa5.08□□□□□ -1.6
CFHR3-204ENST00000461558 PTPRTO14522 1441 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 GTPBP1O00178 669 aaKnown RBP5.07□□□□□ -1.6
CFHR3-204ENST00000461558 PSMD9O00233 223 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 THP07101 528 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 APEHP13798 732 aaKnown RBP5.07□□□□□ -1.6
CFHR3-204ENST00000461558 COPB1P53618 953 aaKnown RBP5.07□□□□□ -1.6
CFHR3-204ENST00000461558 NPY5RQ15761 445 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 TMEM65Q6PI78 240 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 PTCHD4Q6ZW05 846 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.07□□□□□ -1.6
CFHR3-204ENST00000461558 MVB12AQ96EY5 273 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 LPAR3Q9UBY5 353 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 CPA4Q9UI42 421 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 PROCRQ9UNN8 238 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 HS3ST3B1Q9Y662 390 aa5.07□□□□□ -1.6
CFHR3-204ENST00000461558 SMG6Q86US8 1419 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 LRPPRCP42704 1394 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 KTN1Q86UP2 1357 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 ZC3H13Q5T200 1668 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 PPRC1Q5VV67 1664 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 ABCA6Q8N139 1617 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 MYO3AQ8NEV4 1616 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 TULP3O75386 442 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 CTSAP10619 480 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 RPS13P62277 151 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 KRTAP27-1Q3LI81 207 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 TMEM240Q5SV17 173 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 CERCAMQ5T4B2 595 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 UBAP2Q5T6F2 1119 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 LVRNQ6Q4G3 990 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 COLCA1Q6ZS62 124 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 KRT78Q8N1N4 520 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 LINC01465Q8N7H1 131 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 DNAJC5GQ8N7S2 189 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 ZBTB8BQ8NAP8 495 aaPredicted RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 BPIFB1Q8TDL5 484 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 THOC3Q96J01 351 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 CTAGE1Q96RT6 745 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 SMAD5Q99717 465 aaKnown RBP5.06□□□□□ -1.6
CFHR3-204ENST00000461558 TRMOQ9BU70 441 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 SPEF1Q9Y4P9 236 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 EFCAB6Q5THR3 1501 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 PPLO60437 1756 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 FANCAO15360 1455 aa5.06□□□□□ -1.6
CFHR3-204ENST00000461558 BRD4O60885 1362 aaPredicted RBP5.05□□□□□ -1.6
CFHR3-204ENST00000461558 MAP3K4Q9Y6R4 1608 aa5.05□□□□□ -1.6
CFHR3-204ENST00000461558 A0A087WWL8 130 aa5.05□□□□□ -1.6
CFHR3-204ENST00000461558 ALG1L2C9J202 215 aa5.05□□□□□ -1.6
CFHR3-204ENST00000461558 M0R3H8 397 aa5.05□□□□□ -1.6
CFHR3-204ENST00000461558 SNUPNO95149 360 aaKnown RBP5.05□□□□□ -1.6
CFHR3-204ENST00000461558 DIO1P49895 249 aa5.05□□□□□ -1.6
CFHR3-204ENST00000461558 PLA1AQ53H76 456 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms