RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 C10orf120Q5SQS8 335 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 CCDC183Q5T5S1 534 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 TRIM65Q6PJ69 517 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 ENOSF1Q7L5Y1 443 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 CCDC186Q7Z3E2 898 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 TADA2BQ86TJ2 420 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 ADGRG2Q8IZP9 1017 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 SIX6OS1Q8N1H7 587 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 DCLK2Q8N568 766 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 UBA3Q8TBC4 463 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 SECISBP2LQ93073 1101 aaKnown RBP16.18■□□□□ 0.18
VARS-219ENST00000461328 SLC8A2Q9UPR5 921 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 PTPRZ1P23471 2315 aaPredicted RBP16.18■□□□□ 0.18
VARS-219ENST00000461328 KCNJ18B7U540 433 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 TBX18O95935 607 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 RARGP13631 454 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 HOXA6P31267 233 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
VARS-219ENST00000461328 USP8P40818 1118 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 OPRD1P41143 372 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 PSEN1P49768 467 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 TKTL1P51854 596 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 MFAP3P55082 362 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 KCNJ12Q14500 433 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 STILQ15468 1287 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 STX1AQ16623 288 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 PRR23BQ6ZRT6 265 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 RSRC2Q7L4I2 434 aaKnown RBP16.17■□□□□ 0.18
VARS-219ENST00000461328 ARHGAP18Q8N392 663 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 RPLP0P6Q8NHW5 317 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 CCDC26Q8TAB7 109 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 OTUB2Q96DC9 234 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 FAM81BQ96LP2 452 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 KREMEN1Q96MU8 473 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 TUBGCP2Q9BSJ2 902 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 NMUR1Q9HB89 426 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 CYLDQ9NQC7 956 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
VARS-219ENST00000461328 CFAP54Q96N23 3096 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 TULP2O00295 520 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 CALCAP01258 141 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 ADH5P11766 374 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 SLC9A1P19634 815 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 CNR2P34972 360 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 ADIGQ0VDE8 80 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 LPAL2Q16609 132 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 ARHGAP44Q17R89 818 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 GAB4Q2WGN9 574 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 VWA3BQ502W6 1294 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 LY6G5CQ5SRR4 150 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 GJB7Q6PEY0 223 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 LCLAT1Q6UWP7 414 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 RBM43Q6ZSC3 357 aaKnown RBP16.16■□□□□ 0.18
VARS-219ENST00000461328 BBS7Q8IWZ6 715 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 KIAA2013Q8IYS2 634 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 EZH1Q92800 747 aaPredicted RBP16.16■□□□□ 0.18
VARS-219ENST00000461328 ACDQ96AP0 544 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
VARS-219ENST00000461328 ULBP1Q9BZM6 244 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 UBXN6Q9BZV1 441 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 NDST4Q9H3R1 872 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 SAMSN1Q9NSI8 373 aaKnown RBP16.16■□□□□ 0.18
VARS-219ENST00000461328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.16■□□□□ 0.18
VARS-219ENST00000461328 OSER1Q9NX31 292 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 APEX2Q9UBZ4 518 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 RASAL2Q9UJF2 1139 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 DNMT3LQ9UJW3 386 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 LSM7Q9UK45 103 aaKnown RBP16.16■□□□□ 0.18
VARS-219ENST00000461328 NUDT5Q9UKK9 219 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
VARS-219ENST00000461328 USP3Q9Y6I4 520 aa16.16■□□□□ 0.18
VARS-219ENST00000461328 GTPBP10A4D1E9 387 aaKnown RBP16.15■□□□□ 0.18
VARS-219ENST00000461328 RNF225M0QZC1 329 aaPredicted RBP16.15■□□□□ 0.18
VARS-219ENST00000461328 MDM4O15151 490 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 HRO43593 1189 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 ZBED1O96006 694 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 TPM2P07951 284 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 LCP1P13796 627 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 HOXC13P31276 330 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 PLA2G4AP47712 749 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 PXNP49023 591 aaPredicted RBP16.15■□□□□ 0.18
VARS-219ENST00000461328 RGS7P49802 495 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 ZNF132P52740 706 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 SEC13P55735 322 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 YWHAGP61981 247 aaKnown RBP eCLIP16.15■□□□□ 0.18
VARS-219ENST00000461328 GAD2Q05329 585 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 SRSF5Q13243 272 aaKnown RBP16.15■□□□□ 0.18
VARS-219ENST00000461328 SIM2Q14190 667 aaPredicted RBP16.15■□□□□ 0.18
VARS-219ENST00000461328 RHBDF2Q6PJF5 856 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 MIB1Q86YT6 1006 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 WBP2Q969T9 261 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 PNKPQ96T60 521 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 KLF16Q9BXK1 252 aaPredicted RBP16.15■□□□□ 0.18
VARS-219ENST00000461328 TAB2Q9NYJ8 693 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 GMEB2Q9UKD1 530 aa16.15■□□□□ 0.18
VARS-219ENST00000461328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms