RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 Q8NFD4 153 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 TRAPPC12Q8WVT3 735 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 RAPGEF5Q92565 580 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 KIFAP3Q92845 792 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 TNFRSF25Q93038 417 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 TCTN2Q96GX1 697 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 ZFYVE21Q9BQ24 234 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 CDADC1Q9BWV3 514 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 TRIM7Q9C029 511 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 USP44Q9H0E7 712 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 TTYH1Q9H313 450 aaPredicted RBP3.35□□□□□ -1.87
RBM39-221ENST00000461283 ELAC1Q9H777 363 aaKnown RBP3.35□□□□□ -1.87
RBM39-221ENST00000461283 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 ABHD10Q9NUJ1 306 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 GALNT8Q9NY28 637 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 COL20A1Q9P218 1284 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 CNOT8Q9UFF9 292 aaKnown RBP3.35□□□□□ -1.87
RBM39-221ENST00000461283 TMPRSS11EQ9UL52 423 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 SIK3Q9Y2K2 1263 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 AKAP11Q9UKA4 1901 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 LAMB1P07942 1786 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 DDX60Q8IY21 1712 aaKnown RBP3.35□□□□□ -1.87
RBM39-221ENST00000461283 DUOX1Q9NRD9 1551 aa3.35□□□□□ -1.87
RBM39-221ENST00000461283 ITIH6Q6UXX5 1313 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 A0A088AWK7 358 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 SLC35F4A4IF30 521 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 PABPN1LA6NDY0 278 aaKnown RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 FAM90A27PA6NNH2 459 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 TMEM233B4DJY2 109 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 M0R082 166 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 POLRMTO00411 1230 aaKnown RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 IFIT3O14879 490 aaKnown RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 GSTA4O15217 222 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 PPP1R11O60927 126 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 COBLO75128 1261 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 TGDSO95455 350 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 HSPA4LO95757 839 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 MMEP08473 750 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 HNRNPA1P09651 372 aaKnown RBP eCLIP3.34□□□□□ -1.871e-12■■■□□ 14.6
RBM39-221ENST00000461283 UBTFL1P0CB47 393 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 FGFR2P21802 821 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 MARCKSP29966 332 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 KIF5BP33176 963 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 CD68P34810 354 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 SERPINF1P36955 418 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 DPP6P42658 865 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 MAN2A2P49641 1150 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 SMCPP49901 116 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 PLCD1P51178 756 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 POLE2P56282 527 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 BPIFB3P59826 476 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 BPIFB4P59827 614 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 NCALDP61601 193 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ITIH3Q06033 890 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 BTG3Q14201 252 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 PLCL1Q15111 1095 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 CMPK2Q5EBM0 449 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 GKAP1Q5VSY0 366 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 PRAMEF9Q5VWM5 478 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 RESP18Q5W5W9 173 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 TRIM68Q6AZZ1 485 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 IQCEQ6IPM2 695 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 MFSD6Q6ZSS7 791 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 STOX1Q6ZVD7 989 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 MCM10Q7L590 875 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 LCA5Q86VQ0 697 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 PPP1R3BQ86XI6 285 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 NAT8LQ8N9F0 302 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 LINS1Q8NG48 757 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ZNF417Q8TAU3 575 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 SMCR8Q8TEV9 937 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 C17orf50Q8WW18 174 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 PIGBQ92521 554 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ANKS1AQ92625 1134 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 AZIN2Q96A70 460 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 CDHR1Q96JP9 859 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 COG8Q96MW5 612 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ANKRD27Q96NW4 1050 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 AGAP3Q96P47 875 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ACAP3Q96P50 834 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 NEK1Q96PY6 1258 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ZNF587Q96SQ5 575 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 CHP1Q99653 195 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 GPATCH1Q9BRR8 931 aaKnown RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 ACE2Q9BYF1 805 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 PAIP1Q9H074 479 aaKnown RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 GHITMQ9H3K2 345 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 RXFP1Q9HBX9 757 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ATP13A2Q9NQ11 1180 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ECHDC1Q9NTX5 307 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 RIC8BQ9NVN3 520 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.34□□□□□ -1.872e-13■□□□□ 9.7
RBM39-221ENST00000461283 SMARCAL1Q9NZC9 954 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 ADAM22Q9P0K1 906 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 MAGEL2Q9UJ55 1249 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 GDF2Q9UK05 429 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 AJAP1Q9UKB5 411 aaPredicted RBP3.34□□□□□ -1.87
RBM39-221ENST00000461283 TTLL3Q9Y4R7 772 aa3.34□□□□□ -1.87
RBM39-221ENST00000461283 BZW2Q9Y6E2 419 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms