RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 RSC1A1Q92681 617 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 SDCCAG3Q96C92 435 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 MARS2Q96GW9 593 aaKnown RBP3.34□□□□□ -1.88
HPS3-203ENST00000460822 LRIG1Q96JA1 1093 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 SERINC2Q96SA4 455 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 MNTQ99583 582 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 NRDE2Q9H7Z3 1164 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 CHODLQ9H9P2 273 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 PREBQ9HCU5 417 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 G6PC2Q9NQR9 355 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 SLC2A4RGQ9NR83 387 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 VSX1Q9NZR4 365 aaPredicted RBP3.34□□□□□ -1.88
HPS3-203ENST00000460822 CEP72Q9P209 647 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 DNAJB11Q9UBS4 358 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 KCND3Q9UK17 655 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 C19orf53Q9UNZ5 99 aaPredicted RBP3.34□□□□□ -1.88
HPS3-203ENST00000460822 RRP7AQ9Y3A4 280 aaKnown RBP3.34□□□□□ -1.88
HPS3-203ENST00000460822 RAD54BQ9Y620 910 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 A0A087X0M5 115 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 A0A1B0GX30 115 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 A0A1W2PPH5 198 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 FSD2A1L4K1 749 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 ANKRD18BA2A2Z9 1011 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A18PA6NE21 464 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A16PA6NEW6 464 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A5PA8MXJ8 464 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 E7EVH7 732 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 TAF5LO75529 589 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 RECQL4O94761 1208 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 RTN3O95197 1032 aaPredicted RBP3.33□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A15PP0C7V4 464 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 FAM90A14PP0C7W9 464 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 HGFP14210 728 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 KCNA3P22001 575 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 SERPINA4P29622 427 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 LRPAP1P30533 357 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 GCLCP48506 637 aaPredicted RBP3.33□□□□□ -1.88
HPS3-203ENST00000460822 DGKEP52429 567 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 INHBCP55103 352 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 CASP6P55212 293 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 DPTQ07507 201 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 ZNF844Q08AG5 666 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 PDCLQ13371 301 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 KRT32Q14532 448 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 PTCHD3Q3KNS1 767 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 TRIM60Q495X7 471 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 SLC9C2Q5TAH2 1124 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 ATG16L1Q676U5 607 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 HAUS3Q68CZ6 603 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 TMEM108Q6UXF1 575 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 SYT13Q7L8C5 426 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 SPARTQ8N0X7 666 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 AMER2Q8N7J2 671 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 MDGA1Q8NFP4 955 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 ADAMTS18Q8TE60 1221 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 TMEM171Q8WVE6 324 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 CPT1BQ92523 772 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 HAS1Q92839 578 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 CHFRQ96EP1 664 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 RNPEPQ9H4A4 650 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 GBA2Q9HCG7 927 aaPredicted RBP3.33□□□□□ -1.88
HPS3-203ENST00000460822 DNAJC16Q9Y2G8 782 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.33□□□□□ -1.88
HPS3-203ENST00000460822 XDHP47989 1333 aa3.33□□□□□ -1.88
HPS3-203ENST00000460822 CCDC195A0A1B0GUA6 201 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 PGPEP1LA6NFU8 196 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 TMEM191CA6NGB0 347 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 KIF28PB7ZC32 967 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 STX16-NPEPL1H3BU86 382 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 STX16O14662 325 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 DHHO43323 396 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 FAM20BO75063 409 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 RPP40O75818 363 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 SPATA31D3P0C874 917 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 HK1P19367 917 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 GCSHP23434 173 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 MGAT1P26572 445 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 COPB2P35606 906 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ZEB1P37275 1124 aaPredicted RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 SMAD1Q15797 465 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 GALNTL6Q49A17 601 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 RABL3Q5HYI8 236 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 IGFL4Q6B9Z1 124 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 PDXDC1Q6P996 788 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 SPATA31D4Q6ZUB0 917 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 BBS12Q6ZW61 710 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ANKS1BQ7Z6G8 1248 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 ABHD5Q8WTS1 349 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 WDR60Q8WVS4 1066 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 RFFLQ8WZ73 363 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 NUDT16L1Q9BRJ7 211 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 ACAD9Q9H845 621 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 UNKLQ9H9P5 680 aaKnown RBP3.32□□□□□ -1.88
HPS3-203ENST00000460822 NOD2Q9HC29 1040 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 PI4KBQ9UBF8 816 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 VPS51Q9UID3 782 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 CNTN6Q9UQ52 1028 aa3.32□□□□□ -1.88
HPS3-203ENST00000460822 CLCA2Q9UQC9 943 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms