RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 AWAT1Q58HT5 328 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 CC2D1BQ5T0F9 858 aaKnown RBP2.47□□□□□ -2.01
PTPN22-203ENST00000460620 ZDHHC24Q6UX98 284 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 NPNTQ6UXI9 565 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 MICU3Q86XE3 530 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.47□□□□□ -2.01
PTPN22-203ENST00000460620 PNPLA1Q8N8W4 532 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 OR56A3Q8NH54 315 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 JPH3Q8WXH2 748 aaPredicted RBP2.47□□□□□ -2.01
PTPN22-203ENST00000460620 TRIM43Q96BQ3 446 aaPredicted RBP2.47□□□□□ -2.01
PTPN22-203ENST00000460620 NMD3Q96D46 503 aaKnown RBP2.47□□□□□ -2.01
PTPN22-203ENST00000460620 EDC3Q96F86 508 aaKnown RBP2.47□□□□□ -2.01
PTPN22-203ENST00000460620 WBP1Q96G27 269 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 WDYHV1Q96HA8 205 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 TMEM60Q9H2L4 133 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 FAM83DQ9H4H8 585 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 ATP6V0A4Q9HBG4 840 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 ZNF180Q9UJW8 692 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 SQORQ9Y6N5 450 aa2.47□□□□□ -2.01
PTPN22-203ENST00000460620 CAPN8A6NHC0 703 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 AQP7P3A6NL99 342 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 B4DGG1 531 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 PYCARD-AS1I3L0S3 204 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 CLIC1O00299 241 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 TBX3O15119 743 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 USP12O75317 370 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 CD63P08962 238 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 U2AF1L5P0DN76 240 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 CYP19A1P11511 503 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 ADRA1DP25100 572 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 PTDSS1P48651 473 aaKnown RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 PGDP52209 483 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 NANOS2P60321 138 aaKnown RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 U2AF1Q01081 240 aaKnown RBP eCLIP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 MCL1Q07820 350 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 ERV3-1Q14264 604 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 MFSD13AQ14CX5 517 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 TTF1Q15361 905 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 PFKFB3Q16875 520 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 FAM110CQ1W6H9 321 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SKAP1Q86WV1 359 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 MMP21Q8N119 569 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 ZBTB34Q8NCN2 500 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 BCAS4Q8TDM0 211 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 KAZALD1Q96I82 304 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 VPS50Q96JG6 964 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 FAM234AQ9H0X4 552 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 STEAP1Q9UHE8 339 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 FZD4Q9ULV1 537 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SPATA31A1Q5TZJ5 1347 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 FAM227AF5H4B4 570 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 H7C4K7 107 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SMAD6O43541 496 aaKnown RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 AKAP10O43572 662 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 RASSF9O75901 435 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 PIAS2O75928 621 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 INMTO95050 263 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 MCM5P33992 734 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 CPA2P48052 419 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 HTR6P50406 440 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SUMO3P55854 103 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 TXNL4AP83876 142 aaKnown RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 B4GALNT1Q00973 533 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SLC14A1Q13336 389 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 MTX1Q13505 466 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 STIM1Q13586 685 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SLC29A2Q14542 456 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 CLCA4Q14CN2 919 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 DAB2IPQ5VWQ8 1189 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 MZT2AQ6P582 158 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 COLCA1Q6ZS62 124 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 OVCH2Q7RTZ1 564 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 KIAA0319LQ8IZA0 1049 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 SMRP1Q8NCR6 262 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 ZNF548Q8NEK5 533 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 ZBTB45Q96K62 511 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 B3GNT5Q9BYG0 378 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 DDX56Q9NY93 547 aaKnown RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 AFF4Q9UHB7 1163 aaKnown RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 RIMKLBQ9ULI2 386 aa2.46□□□□□ -2.02
PTPN22-203ENST00000460620 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.46□□□□□ -2.02
PTPN22-203ENST00000460620 FOXN3O00409 490 aaPredicted RBP2.45□□□□□ -2.02
PTPN22-203ENST00000460620 INPPL1O15357 1258 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 CTNND1O60716 968 aaKnown RBP2.45□□□□□ -2.02
PTPN22-203ENST00000460620 IGSF3O75054 1194 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 PARP1P09874 1014 aaKnown RBP2.45□□□□□ -2.02
PTPN22-203ENST00000460620 HGFP14210 728 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 ACVR2AP27037 513 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 CPT1AP50416 773 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 YPEL5P62699 121 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 GPC5P78333 572 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 EPM2AIP1Q7L775 607 aaPredicted RBP2.45□□□□□ -2.02
PTPN22-203ENST00000460620 KCTD20Q7Z5Y7 419 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 YAF2Q8IY57 180 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 ACRBPQ8NEB7 543 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 ZDHHC12Q96GR4 267 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 THOC3Q96J01 351 aaKnown RBP2.45□□□□□ -2.02
PTPN22-203ENST00000460620 LRGUKQ96M69 825 aa2.45□□□□□ -2.02
PTPN22-203ENST00000460620 CINPQ9BW66 212 aaPredicted RBP2.45□□□□□ -2.02
PTPN22-203ENST00000460620 STK31Q9BXU1 1019 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms