RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ESX1Q8N693 406 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 DNAJC5GQ8N7S2 189 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 FRS2Q8WU20 508 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 APBB2Q92870 758 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 CD101Q93033 1021 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 RNPC3Q96LT9 517 aaKnown RBP10.83□□□□□ -0.68
HERC4-207ENST00000460168 UROC1Q96N76 676 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 MIS12Q9H081 205 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 TMEM161AQ9NX61 479 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 DDX43Q9NXZ2 648 aaKnown RBP10.83□□□□□ -0.68
HERC4-207ENST00000460168 GALNT8Q9NY28 637 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 TMCO1Q9UM00 188 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
HERC4-207ENST00000460168 TCRBV5S1A1TA0A578 114 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 TMEM191CA6NGB0 347 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 E5RJQ4 531 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 INPPL1O15357 1258 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 FGGP02679 453 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 TROVE2P10155 538 aaKnown RBP eCLIP10.82□□□□□ -0.68
HERC4-207ENST00000460168 HSPA8P11142 646 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 ODC1P11926 461 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 RGS7P49802 495 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 BCAT1P54687 386 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 FAM189BP81408 668 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 ZNF211Q13398 564 aaPredicted RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 GPNMBQ14956 572 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 TIGD5Q53EQ6 642 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 BOLA3Q53S33 107 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 XYLT1Q86Y38 959 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 WDR75Q8IWA0 830 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 SUN5Q8TC36 379 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 SLC2A14Q8TDB8 520 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 DIS3LQ8TF46 1054 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 TOX2Q96NM4 488 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 RBM12Q9NTZ6 932 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 VPS18Q9P253 973 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 ATXN10Q9UBB4 475 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 DKK3Q9UBP4 350 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 ATP11BQ9Y2G3 1177 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 PCDHB7Q9Y5E2 793 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 PCDHA3Q9Y5H8 950 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 A6NHS1 94 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 I3L4J1 428 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 ENPP3O14638 875 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 GABRDO14764 452 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 CLASP2O75122 1294 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 ATP2C2O75185 946 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 PFKMP08237 780 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 GABRB2P47870 512 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 LBX1P52954 281 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 TUBA1BP68363 451 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 BST2Q10589 180 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 ZNF268Q14587 947 aaPredicted RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 INAQ16352 499 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 PKDCCQ504Y2 493 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 FAM102AQ5T9C2 384 aaPredicted RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 PMF1Q6P1K2 205 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 TUBA1AQ71U36 451 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 RASGEF1CQ8N431 466 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 KIAA1958Q8N8K9 716 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 ANKRD52Q8NB46 1076 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 ANKZF1Q9H8Y5 726 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
HERC4-207ENST00000460168 LRFN2Q9ULH4 789 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 TET1Q8NFU7 2136 aa10.82□□□□□ -0.68
HERC4-207ENST00000460168 A0A1B0GVG6 124 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 TMEM247A6NEH6 219 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 SIGLEC16A6NMB1 481 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 KRIT1O00522 736 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 B3GALNT1O75752 331 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 LINGO3P0C6S8 592 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 CCDC166P0CW27 439 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 PTPN1P18031 435 aaKnown RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 CTNNA2P26232 953 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 CYP2C18P33260 490 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 S100A5P33763 92 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 RFC1P35251 1148 aaPredicted RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 GJC1P36383 396 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 BRCC3P46736 316 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 AARSP49588 968 aaKnown RBP eCLIP10.81□□□□□ -0.68
HERC4-207ENST00000460168 PEX5P50542 639 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 SNX16P57768 344 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 PIGHQ14442 188 aaPredicted RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 SNCBQ16143 134 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 PKN2Q16513 984 aaKnown RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 LONRF2Q1L5Z9 754 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 OR6B2Q6IFH4 312 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 DEFB128Q7Z7B8 93 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 METTL23Q86XA0 190 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 SLC35F5Q8WV83 523 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 AP1M1Q9BXS5 423 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms