RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CDR2LQ86X02 465 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ARHGEF19Q8IW93 802 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 C1orf54Q8WWF1 131 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF653Q96CK0 615 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 NR1H4Q96RI1 486 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ACO2Q99798 780 aaKnown RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ADPGKQ9BRR6 497 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 TARS2Q9BW92 718 aaKnown RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 EIF2AQ9BY44 585 aaKnown RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 PBX4Q9BYU1 374 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 MSRAQ9UJ68 235 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 PCDHA11Q9Y5I1 949 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 MAGEA13PA6NCF6 341 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 A8MXQ7 604 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 IL1BP01584 269 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 EPHB2P29323 1055 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 MAGEA4P43358 317 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 CYP2J2P51589 502 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 VAMP7P51809 220 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 MFAP3P55082 362 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 KPNB1Q14974 876 aaKnown RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 KRT72Q14CN4 511 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 RAB30Q15771 203 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 DRICH1Q6PGQ1 229 aaPredicted RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 RNF169Q8NCN4 708 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 PGBD4Q96DM1 585 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 SMC6Q96SB8 1091 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 YME1L1Q96TA2 773 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 TRABDQ9H4I3 376 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 PDZD7Q9H5P4 517 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 CHST7Q9NS84 486 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 NMRK1Q9NWW6 199 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF212Q9UDV6 495 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 TNFSF13BQ9Y275 285 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 TYROBPO43914 113 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 DGKIO75912 1065 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 KLRC2P26717 231 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 GCAP28676 217 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 PBX2P40425 430 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 HTRA4P83105 476 aaPredicted RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 SLC34A1Q06495 639 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 DNAJC3Q13217 504 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 ZPBP2Q6X784 338 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF598Q86UK7 904 aaKnown RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 DRAXINQ8NBI3 349 aaPredicted RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 DDX43Q9NXZ2 648 aaKnown RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 STX18Q9P2W9 335 aaKnown RBP16.43■□□□□ 0.22
CMTM3-203ENST00000460097 ZFP69BQ9UJL9 534 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
CMTM3-203ENST00000460097 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 TGDSO95455 350 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 TROVE2P10155 538 aaKnown RBP eCLIP16.42■□□□□ 0.22
CMTM3-203ENST00000460097 ADSSP30520 456 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 AP1B1Q10567 949 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 EEF1DP3Q658K8 133 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 NLRP9Q7RTR0 991 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 CLNKQ7Z7G1 428 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 MRPL10Q7Z7H8 261 aaKnown RBP16.42■□□□□ 0.22
CMTM3-203ENST00000460097 GATA6Q92908 595 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 DDX27Q96GQ7 796 aaKnown RBP16.42■□□□□ 0.22
CMTM3-203ENST00000460097 FAM210AQ96ND0 272 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 TCHPQ9BT92 498 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 SYNCQ9H7C4 482 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 IPPQ9Y573 584 aa16.42■□□□□ 0.22
CMTM3-203ENST00000460097 EXOC1LA0A1B0GW35 172 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 HOXA2O43364 376 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 TOM1L1O75674 476 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 MYOGP15173 224 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ATF7P17544 494 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 DNAJB2P25686 324 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 LIG4P49917 911 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 TMED2Q15363 201 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 TAF1BQ53T94 588 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 IZUMO3Q5VZ72 239 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 MAP4K3Q8IVH8 894 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 HACE1Q8IYU2 909 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 SMG8Q8ND04 991 aaKnown RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ALKBH8Q96BT7 664 aaKnown RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF689Q96CS4 500 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 PTCD3Q96EY7 689 aaKnown RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ACCSQ96QU6 501 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 PTPRHQ9HD43 1115 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ANKFY1Q9P2R3 1169 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 EXOC7Q9UPT5 735 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 F8W8V4 182 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 SOX1O00570 391 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 FGFR1P11362 822 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 CYP11B1P15538 503 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 RRM1P23921 792 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 TUBP50607 506 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 PPP3CAQ08209 521 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 CLEC16AQ2KHT3 1053 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms