RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 AFG1LQ8WV93 481 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 TFAP2BQ92481 460 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 RILPL2Q969X0 211 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 C3orf49Q96BT1 292 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 ZNF503Q96F45 646 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 TBATAQ96M53 351 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 EIF3CQ99613 913 aaKnown RBP6.29□□□□□ -1.4
CCDC50-203ENST00000460064 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 VPS16Q9H269 839 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 ELAC1Q9H777 363 aaKnown RBP6.29□□□□□ -1.4
CCDC50-203ENST00000460064 DAPP1Q9UN19 280 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
CCDC50-203ENST00000460064 EFCAB8A8MWE9 144 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 MPPED1O15442 326 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 DHHO43323 396 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 PMPCBO75439 489 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 CER1O95813 267 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 NR2F6P10588 404 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 ZFXP17010 805 aaPredicted RBP6.28□□□□□ -1.4
CCDC50-203ENST00000460064 DRD1P21728 446 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 GKP32189 559 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 ADD2P35612 726 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 ZEB1P37275 1124 aaPredicted RBP6.28□□□□□ -1.4
CCDC50-203ENST00000460064 PRKAA2P54646 552 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 EFEMP1Q12805 493 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 SPATS1Q496A3 300 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 KAZNQ674X7 775 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 NFRKBQ6P4R8 1299 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 LVRNQ6Q4G3 990 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 LRRC71Q8N4P6 559 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 SPPL3Q8TCT6 385 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 CSGALNACT1Q8TDX6 532 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 VPS50Q96JG6 964 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 UBA5Q9GZZ9 404 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 TRIM36Q9NQ86 728 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 ANAPC4Q9UJX5 808 aa6.28□□□□□ -1.4
CCDC50-203ENST00000460064 WDR27A2RRH5 827 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 RRN3P2A6NIE6 340 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 H0Y3Z8 333 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 AP4M1O00189 453 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 KIAA0355O15063 1070 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 CBFA2T3O75081 653 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 NXPH3O95157 252 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 AGR2O95994 175 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 PRKCBP05771 671 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 CREB1P16220 341 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
CCDC50-203ENST00000460064 MTAPQ13126 283 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 SEMA3BQ13214 749 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 BFSP2Q13515 415 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 ST3GAL2Q16842 350 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 LSM12Q3MHD2 195 aaKnown RBP6.27□□□□□ -1.41
CCDC50-203ENST00000460064 ZNF569Q5MCW4 686 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 MSANTD2Q6P1R3 559 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 DPY19L3Q6ZPD9 716 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 C2CD5Q86YS7 1000 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 P3H2Q8IVL5 708 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 CLASRPQ8N2M8 674 aaKnown RBP6.27□□□□□ -1.41
CCDC50-203ENST00000460064 HMGB4Q8WW32 186 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 RFKQ969G6 155 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 PBKQ96KB5 322 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 EIF2AK1Q9BQI3 630 aaKnown RBP6.27□□□□□ -1.41
CCDC50-203ENST00000460064 PYM1Q9BRP8 204 aaKnown RBP6.27□□□□□ -1.41
CCDC50-203ENST00000460064 ARHGEF3Q9NR81 526 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 FEM1BQ9UK73 627 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 CNTN6Q9UQ52 1028 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 SH2B3Q9UQQ2 575 aa6.27□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A18PA6NE21 464 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A16PA6NEW6 464 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A9PA6NNJ1 464 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A5PA8MXJ8 464 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 KIF28PB7ZC32 967 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CES2O00748 559 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 NCAM2O15394 837 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 RPP40O75818 363 aaKnown RBP6.26□□□□□ -1.41
CCDC50-203ENST00000460064 KRT38O76015 456 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 DLDP09622 509 aaKnown RBP6.26□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A15PP0C7V4 464 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A14PP0C7W9 464 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CKMT1AP12532 417 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CD53P19397 219 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 PAPOLAP51003 745 aaKnown RBP6.26□□□□□ -1.41
CCDC50-203ENST00000460064 DGKQP52824 942 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 TXNRD1Q16881 649 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 TRIM60Q495X7 471 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 PLAC9Q5JTB6 97 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 GRHL2Q6ISB3 625 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CCDC144NLQ6NUI1 221 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 Q6ZNX1 250 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 PIK3AP1Q6ZUJ8 805 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 PARS2Q7L3T8 475 aaKnown RBP6.26□□□□□ -1.41
CCDC50-203ENST00000460064 KRT27Q7Z3Y8 459 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 TRABD2AQ86V40 505 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 SIRT6Q8N6T7 355 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CPT1BQ92523 772 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 USP13Q92995 863 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms