RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 GAREM1Q9H706 876 aa8.38□□□□□ -1.07
HPS4-207ENST00000459918 SPHK2Q9NRA0 654 aa8.38□□□□□ -1.07
HPS4-207ENST00000459918 CACNA2D2Q9NY47 1150 aa8.38□□□□□ -1.07
HPS4-207ENST00000459918 SEL1LQ9UBV2 794 aa8.38□□□□□ -1.07
HPS4-207ENST00000459918 LSM7Q9UK45 103 aaKnown RBP8.38□□□□□ -1.07
HPS4-207ENST00000459918 BPTFQ12830 3046 aa8.38□□□□□ -1.07
HPS4-207ENST00000459918 PTPRJQ12913 1337 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 ZNF233A6NK53 670 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 HOXC11O43248 304 aaPredicted RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 SYNCRIPO60506 623 aaKnown RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 BMP15O95972 392 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 DLATP10515 647 aaKnown RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 ACADMP11310 421 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 TYRP14679 529 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 TNNI1P19237 187 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 GARTP22102 1010 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 WARSP23381 471 aaKnown RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 CD6P30203 668 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 ABCG1P45844 678 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 DGKGP49619 791 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 ARID5AQ03989 594 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 CYP4F3Q08477 520 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 TRPC3Q13507 836 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 SURF1Q15526 300 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 IL27RAQ6UWB1 636 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 SV2BQ7L1I2 683 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 TMEM25Q86YD3 366 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 MIB1Q86YT6 1006 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 GALNT15Q8N3T1 639 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 GLIS3Q8NEA6 775 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 PIP4K2CQ8TBX8 421 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 MRGPRX1Q96LB2 322 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 ACOX2Q99424 681 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 CDC6Q99741 560 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 MRPL45Q9BRJ2 306 aaKnown RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 CBWD1Q9BRT8 395 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 GPR174Q9BXC1 333 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 ZNF518BQ9C0D4 1074 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 DPEP3Q9H4B8 488 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 CCSER2Q9H7U1 834 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 CD93Q9NPY3 652 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.071e-7■■■■■ 102.5
HPS4-207ENST00000459918 TM7SF3Q9NS93 570 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 INTS13Q9NVM9 706 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 CHORDC1Q9UHD1 332 aaPredicted RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 SIX4Q9UIU6 781 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 PCOLCE2Q9UKZ9 415 aa8.37□□□□□ -1.07
HPS4-207ENST00000459918 TP53BP1Q12888 1972 aaPredicted RBP8.37□□□□□ -1.07
HPS4-207ENST00000459918 SMG1Q96Q15 3661 aaKnown RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 SHROOM3Q8TF72 1996 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 A0A0A0MRY4 1105 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 A0A1W2PQF6 199 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 FAM149AA5PLN7 773 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 CLDN5O00501 218 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 TRIM24O15164 1050 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 BCAT2O15382 392 aaPredicted RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 FLRT2O43155 660 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 PHACTR2O75167 634 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 CILPO75339 1184 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 PTPN1P18031 435 aaKnown RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 GJB2P29033 226 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 CASP5P51878 434 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 SLC5A3P53794 718 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 CACNA2D1P54289 1103 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 ALCAMQ13740 583 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 SUZ12Q15022 739 aaKnown RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 DCAF12L1Q5VU92 463 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 RRAGBQ5VZM2 374 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 SCARA3Q6AZY7 606 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 SLCO6A1Q86UG4 719 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 FAM124AQ86V42 546 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 WDR49Q8IV35 697 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 ETFBKMTQ8IXQ9 262 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 PHTF2Q8N3S3 785 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 RDH13Q8NBN7 331 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 B3GALNT2Q8NCR0 500 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 OR5B17Q8NGF7 314 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 OVCA2Q8WZ82 227 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 CCDC127Q96BQ5 260 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 TOE1Q96GM8 510 aaKnown RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 ZNF419Q96HQ0 510 aaPredicted RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 BBC3Q96PG8 261 aaPredicted RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 IL21RQ9HBE5 538 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 DMAP1Q9NPF5 467 aaPredicted RBP8.36□□□□□ -1.07
HPS4-207ENST00000459918 GMIPQ9P107 970 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 WDR35Q9P2L0 1181 aa8.36□□□□□ -1.07
HPS4-207ENST00000459918 ACACAQ13085 2346 aa8.35□□□□□ -1.07
HPS4-207ENST00000459918 TRABD2BA6NFA1 517 aa8.35□□□□□ -1.07
HPS4-207ENST00000459918 KIAA0391O15091 583 aaKnown RBP8.35□□□□□ -1.07
HPS4-207ENST00000459918 TLR5O60602 858 aa8.35□□□□□ -1.07
HPS4-207ENST00000459918 PPP1R37O75864 691 aa8.35□□□□□ -1.07
HPS4-207ENST00000459918 PRB1P04280 392 aa8.35□□□□□ -1.07
HPS4-207ENST00000459918 ATXN1LP0C7T5 689 aaKnown RBP8.35□□□□□ -1.07
HPS4-207ENST00000459918 TRIM21P19474 475 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms