RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MTF1Q14872 753 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 CLEC16AQ2KHT3 1053 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TDRD12Q587J7 1177 aaKnown RBP13.45□□□□□ -0.26
COL18A1-206ENST00000459895 C10orf120Q5SQS8 335 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 HGSNATQ68CP4 663 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TRIM72Q6ZMU5 477 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TMEM110Q86TL2 294 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 FMNL3Q8IVF7 1028 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 ARHGAP18Q8N392 663 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 SLC44A3Q8N4M1 653 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 CELF5Q8N6W0 485 aaKnown RBP13.45□□□□□ -0.26
COL18A1-206ENST00000459895 SH3RF2Q8TEC5 729 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 DEPDC1BQ8WUY9 529 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 CPA5Q8WXQ8 436 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 IRGQQ8WZA9 623 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 ZFYVE19Q96K21 471 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 AGPAT1Q99943 283 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 C11orf70Q9BRQ4 267 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 NACA2Q9H009 215 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 HAUS4Q9H6D7 363 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 SYNCQ9H7C4 482 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TDP1Q9NUW8 608 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 AIPL1Q9NZN9 384 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 RASAL2Q9UJF2 1139 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.264e-11■■■□□ 18.8
COL18A1-206ENST00000459895 MIA3Q5JRA6 1907 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TNFRSF10AO00220 468 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 LEFTY2O00292 366 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 DPYSL4O14531 572 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 MSI1O43347 362 aaKnown RBP13.44□□□□□ -0.26
COL18A1-206ENST00000459895 DCXO43602 365 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 PLEKP08567 350 aaPredicted RBP13.44□□□□□ -0.26
COL18A1-206ENST00000459895 RALAP11233 206 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 SRFP11831 508 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 TCF3P15923 654 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 PSMC3P17980 439 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 KLHL30Q0D2K2 578 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 EFEMP1Q12805 493 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 BSPRYQ5W0U4 402 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 RSRC2Q7L4I2 434 aaKnown RBP13.44□□□□□ -0.26
COL18A1-206ENST00000459895 ZNF571Q7Z3V5 609 aaPredicted RBP13.44□□□□□ -0.26
COL18A1-206ENST00000459895 XYLT1Q86Y38 959 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 MIB1Q86YT6 1006 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 SCUBE3Q8IX30 993 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 SLC30A5Q8TAD4 765 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 BPIFB1Q8TDL5 484 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 WBP2Q969T9 261 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 NXPE3Q969Y0 559 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 FAM149B1Q96BN6 582 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 MRFAP1L1Q96HT8 127 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 ANP32EQ9BTT0 268 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
COL18A1-206ENST00000459895 LUC7L2Q9Y383 392 aaKnown RBP13.44□□□□□ -0.26
COL18A1-206ENST00000459895 ARNTLO00327 626 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
COL18A1-206ENST00000459895 DAB1O75553 588 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 FYNP06241 537 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 CCDC172P0C7W6 258 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 SKILP12757 684 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 UNGP13051 313 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-206ENST00000459895 GDI1P31150 447 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 NSFP46459 744 aaKnown RBP13.43□□□□□ -0.26
COL18A1-206ENST00000459895 PTP4A2Q12974 167 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 TBX2Q13207 712 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-206ENST00000459895 TAF5Q15542 800 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 BTBD8Q5XKL5 378 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 TRIM68Q6AZZ1 485 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 MSANTD2Q6P1R3 559 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 KLHDC10Q6PID8 442 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 TOGARAM2Q6ZUX3 1019 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 MON1BQ7L1V2 547 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 MFSD6LQ8IWD5 586 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 E2F7Q96AV8 911 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 DNAJC7Q99615 494 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 NUCKS1Q9H1E3 243 aaKnown RBP13.43□□□□□ -0.26
COL18A1-206ENST00000459895 ABHD10Q9NUJ1 306 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 TAS2R14Q9NYV8 317 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 WNT6Q9Y6F9 365 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 MYO10Q9HD67 2058 aa13.43□□□□□ -0.26
COL18A1-206ENST00000459895 GOLGA8SH3BPF8 625 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 DDX3XO00571 662 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 GRAP2O75791 330 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 MMP8P22894 467 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ATP5C1P36542 298 aaKnown RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 GABRB2P47870 512 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 GPC5P78333 572 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ZXDAP98168 799 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 ARID5BQ14865 1188 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 IER5LQ5T953 404 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 FAM102AQ5T9C2 384 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 OR6B2Q6IFH4 312 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 SLC26A9Q7LBE3 791 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 TADA2BQ86TJ2 420 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 TAC4Q86UU9 113 aa13.42□□□□□ -0.26
COL18A1-206ENST00000459895 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL18A1-206ENST00000459895 DNAAF5Q86Y56 855 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms