RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PMF1Q6P1K2 205 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 DENND1BQ6P3S1 775 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 RSRC2Q7L4I2 434 aaKnown RBP22.84■■□□□ 1.25
SSNA1-202ENST00000459860 GOLGA1Q92805 767 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 MSANTD3Q96H12 275 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 TBC1D17Q9HA65 648 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 NMUR1Q9HB89 426 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 NLRC4Q9NPP4 1024 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 ST7Q9NRC1 585 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 GKN1Q9NS71 199 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.84■■□□□ 1.25
SSNA1-202ENST00000459860 DUS2Q9NX74 493 aaKnown RBP22.84■■□□□ 1.25
SSNA1-202ENST00000459860 PIAS3Q9Y6X2 628 aa22.84■■□□□ 1.25
SSNA1-202ENST00000459860 MIA3Q5JRA6 1907 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 ARNTLO00327 626 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 MAN2B1O00754 1011 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 FBXO21O94952 628 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 GLULP15104 373 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 CLCN1P35523 988 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 GPD2P43304 727 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 C10orf120Q5SQS8 335 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 BTBD8Q5XKL5 378 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 C1orf228Q6PIY5 440 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 SLC47A2Q86VL8 602 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 KIAA1958Q8N8K9 716 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 OSCP1Q8WVF1 389 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 ATP2A3Q93084 1043 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 NKD2Q969F2 451 aaPredicted RBP22.83■■□□□ 1.25
SSNA1-202ENST00000459860 NOX5Q96PH1 765 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 CFAP97Q9P2B7 532 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 PCDHGC3Q9UN70 934 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 MRPS17Q9Y2R5 130 aaKnown RBP22.83■■□□□ 1.25
SSNA1-202ENST00000459860 SH3BP1Q9Y3L3 701 aa22.83■■□□□ 1.25
SSNA1-202ENST00000459860 SLC9A3R1O14745 358 aaPredicted RBP22.82■■□□□ 1.24
SSNA1-202ENST00000459860 PGFP49763 221 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 STARD6P59095 220 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 ITPRIPL2Q3MIP1 535 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 KLHDC10Q6PID8 442 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 ZNF852Q6ZMS4 543 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 CACNA2D4Q7Z3S7 1137 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 SCD5Q86SK9 330 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 SCML4Q8N228 414 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 RIN3Q8TB24 985 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 STK32AQ8WU08 396 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 IRGQQ8WZA9 623 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 TSPY26PQ9H489 355 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 C8orf33Q9H7E9 229 aaPredicted RBP22.82■■□□□ 1.24
SSNA1-202ENST00000459860 RTN4Q9NQC3 1192 aaKnown RBP22.82■■□□□ 1.24
SSNA1-202ENST00000459860 OSER1Q9NX31 292 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 DNMT3LQ9UJW3 386 aa22.82■■□□□ 1.24
SSNA1-202ENST00000459860 KANSL1LA0AUZ9 987 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 PIK3R2O00459 728 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 SART1O43290 800 aaKnown RBP22.81■■□□□ 1.24
SSNA1-202ENST00000459860 STAT1P42224 750 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 MLLT6P55198 1093 aaPredicted RBP22.81■■□□□ 1.24
SSNA1-202ENST00000459860 DAOAP59103 153 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 RUNX3Q13761 415 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 LRSAM1Q6UWE0 723 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 PASD1Q8IV76 773 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 CPA6Q8N4T0 437 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 ZNF276Q8N554 614 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 FAM83CQ9BQN1 747 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 EBF3Q9H4W6 596 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 OLA1Q9NTK5 396 aaKnown RBP22.81■■□□□ 1.24
SSNA1-202ENST00000459860 GTSE1Q9NYZ3 720 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 LSM7Q9UK45 103 aaKnown RBP22.81■■□□□ 1.24
SSNA1-202ENST00000459860 STRIP2Q9ULQ0 834 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 WNT6Q9Y6F9 365 aa22.81■■□□□ 1.24
SSNA1-202ENST00000459860 NFATC1O95644 943 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 TBX18O95935 607 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 IRF1P10914 325 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 CYP11B1P15538 503 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 SOX5P35711 763 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 SNX16P57768 344 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 AMPD2Q01433 879 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 TNK2Q07912 1038 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 UBXN2BQ14CS0 331 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 TRIM68Q6AZZ1 485 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 TTC8Q8TAM2 541 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 RNF139Q8WU17 664 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 MIS12Q9H081 205 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 LHX5Q9H2C1 402 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 ABCC13Q9NSE7 274 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 DLGAP2Q9P1A6 1054 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 TBC1D14Q9P2M4 693 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 RASAL2Q9UJF2 1139 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 NUDT5Q9UKK9 219 aa22.8■■□□□ 1.24
SSNA1-202ENST00000459860 A0A1B0GTH6 734 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 E2F8A0AVK6 867 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 EPHB6O15197 1021 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 TEX33O43247 280 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 GFPT2O94808 682 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 JAM2P57087 298 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 ZXDBP98169 803 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 NR1H3Q13133 447 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 PDCLQ13371 301 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 RALGPS2Q86X27 583 aaPredicted RBP22.79■■□□□ 1.24
SSNA1-202ENST00000459860 MIB1Q86YT6 1006 aa22.79■■□□□ 1.24
SSNA1-202ENST00000459860 ZFRQ96KR1 1074 aaKnown RBP22.79■■□□□ 1.24
SSNA1-202ENST00000459860 NELL2Q99435 816 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms