RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NME8Q8N427 588 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 MRRFQ96E11 262 aaKnown RBP17.36■□□□□ 0.37
CCDC43-202ENST00000457422 KATNAL1Q9BW62 490 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 FRMD8Q9BZ67 464 aaPredicted RBP17.36■□□□□ 0.37
CCDC43-202ENST00000457422 GOLGA2P5Q9HBQ8 144 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 GTF2IRD1Q9UHL9 959 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 IGF2BP3O00425 579 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC43-202ENST00000457422 BBS9Q3SYG4 887 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 RGS9BPQ6ZS82 235 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 TRPM8Q7Z2W7 1104 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 PLCD4Q9BRC7 762 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 SNX25Q9H3E2 840 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 KIF9Q9HAQ2 790 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 PCNTO95613 3336 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 TYROBPO43914 113 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 SPAG7O75391 227 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 SUN1O94901 812 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 LCP1P13796 627 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 ATP2A2P16615 1042 aaKnown RBP17.35■□□□□ 0.37
CCDC43-202ENST00000457422 TAC1P20366 129 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 MAGEA6P43360 314 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 FAM182AQ5T1J6 154 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 PALM2Q8IXS6 379 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 APPL2Q8NEU8 664 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 FBF1Q8TES7 1133 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 GRAMD1AQ96CP6 724 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 PAFAH2Q99487 392 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 SLC12A4Q9UP95 1085 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 IPPQ9Y573 584 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 TEX264Q9Y6I9 313 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 C17orf102A2RUQ5 167 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 TOMM70O94826 608 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 L1CAMP32004 1257 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 SPARCL1Q14515 664 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 MTFR1Q15390 333 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 FBXW10Q5XX13 1052 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 ARRDC4Q8NCT1 418 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 SMG8Q8ND04 991 aaKnown RBP17.35■□□□□ 0.37
CCDC43-202ENST00000457422 ADAM33Q9BZ11 813 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 AP5M1Q9H0R1 490 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 HEY1Q9Y5J3 304 aa17.35■□□□□ 0.37
CCDC43-202ENST00000457422 KCNN4O15554 427 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 ATP2C2O75185 946 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 SPAG6O75602 509 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 DNAJC8O75937 253 aaPredicted RBP17.34■□□□□ 0.37
CCDC43-202ENST00000457422 ZBED1O96006 694 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 IGHA2P01877 340 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 ZFXP17010 805 aaPredicted RBP17.34■□□□□ 0.37
CCDC43-202ENST00000457422 CYP2B6P20813 491 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 WARSP23381 471 aaKnown RBP17.34■□□□□ 0.37
CCDC43-202ENST00000457422 LRPAP1P30533 357 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 FOXN2P32314 431 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
CCDC43-202ENST00000457422 C4orf22Q6V702 233 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 STRADAQ7RTN6 431 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 SPATA21Q7Z572 469 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 ADGRF2Q8IZF7 708 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 TOP6BLQ8N6T0 577 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 SLC2A14Q8TDB8 520 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 MZB1Q8WU39 189 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 TNIP3Q96KP6 325 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 PRKAG3Q9UGI9 489 aa17.34■□□□□ 0.37
CCDC43-202ENST00000457422 XPO1O14980 1071 aaKnown RBP17.33■□□□□ 0.37
CCDC43-202ENST00000457422 MAP3K6O95382 1288 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 FAM163BP0C2L3 166 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 GNAT1P11488 350 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 CYP2F1P24903 491 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 RBL1P28749 1068 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 TKTP29401 623 aaKnown RBP17.33■□□□□ 0.37
CCDC43-202ENST00000457422 ELK3P41970 407 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 XRCC4Q13426 336 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 TAF1CQ15572 869 aaPredicted RBP17.33■□□□□ 0.37
CCDC43-202ENST00000457422 ZKSCAN8Q15776 578 aaPredicted RBP17.33■□□□□ 0.37
CCDC43-202ENST00000457422 PPP6R3Q5H9R7 873 aaPredicted RBP17.33■□□□□ 0.37
CCDC43-202ENST00000457422 SYCP2LQ5T4T6 812 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 OSTM1Q86WC4 334 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 CDKL3Q8IVW4 592 aaPredicted RBP17.33■□□□□ 0.37
CCDC43-202ENST00000457422 C4orf33Q8N1A6 199 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 DCAKDQ8WVC6 231 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 CYTH2Q99418 400 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 MTMR10Q9NXD2 777 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 CHMP2BQ9UQN3 213 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 ARL2BPQ9Y2Y0 163 aa17.33■□□□□ 0.37
CCDC43-202ENST00000457422 HUS1O60921 280 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 RASSF9O75901 435 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 NR2C2P49116 596 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 HUNKP57058 714 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 LILRA4P59901 499 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 EFHC1Q5JVL4 640 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 CST9Q5W186 159 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 CGB2Q6NT52 195 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 IGDCC3Q8IVU1 814 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 PNPLA8Q9NP80 782 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 AP4E1Q9UPM8 1137 aa17.33■□□□□ 0.36
CCDC43-202ENST00000457422 A0A1W2PPM1 405 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 PIAS1O75925 651 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 CA4P22748 312 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms