RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 SMRP1Q8NCR6 262 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 SHKBP1Q8TBC3 707 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 TRIM44Q96DX7 344 aaPredicted RBP14.8□□□□□ -0.04
LINC00887-204ENST00000456816 NECTIN4Q96NY8 510 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 MCEEQ96PE7 176 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 CDK5RAP1Q96SZ6 601 aaKnown RBP14.8□□□□□ -0.04
LINC00887-204ENST00000456816 NUP85Q9BW27 656 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 LRRC3Q9BY71 257 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 S1PR5Q9H228 398 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 KCNF1Q9H3M0 494 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 NMUR1Q9HB89 426 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 IL21Q9HBE4 155 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 POPDC2Q9HBU9 364 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 WDR6Q9NNW5 1121 aaKnown RBP14.8□□□□□ -0.04
LINC00887-204ENST00000456816 ABCC13Q9NSE7 274 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 INTUQ9ULD6 942 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 COG5Q9UP83 839 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 USP15Q9Y4E8 981 aaPredicted RBP14.8□□□□□ -0.04
LINC00887-204ENST00000456816 NCANO14594 1321 aa14.8□□□□□ -0.04
LINC00887-204ENST00000456816 MTCL1Q9Y4B5 1905 aaKnown RBP14.8□□□□□ -0.04
LINC00887-204ENST00000456816 TRAV19A0A0A6YYK7 116 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 TLR5O60602 858 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 TADA3O75528 432 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 CYP1A2P05177 515 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 CCDC175P0C221 793 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 CEBPBP17676 345 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 CCR2P41597 374 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 VAV2P52735 878 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 NAP1L1P55209 391 aaKnown RBP14.79□□□□□ -0.04
LINC00887-204ENST00000456816 GSCP56915 257 aaPredicted RBP14.79□□□□□ -0.04
LINC00887-204ENST00000456816 SMAD4Q13485 552 aaKnown RBP14.79□□□□□ -0.04
LINC00887-204ENST00000456816 MAMLD1Q13495 774 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 DCAF6Q58WW2 860 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 TXNDC8Q6A555 127 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 BHLHA9Q7RTU4 235 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 TMEM150AQ86TG1 271 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 MAB21L3Q8N8X9 362 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 ITFG1Q8TB96 612 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 ARHGEF26Q96DR7 871 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 AVENQ9NQS1 362 aaPredicted RBP14.79□□□□□ -0.04
LINC00887-204ENST00000456816 OLA1Q9NTK5 396 aaKnown RBP14.79□□□□□ -0.04
LINC00887-204ENST00000456816 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC00887-204ENST00000456816 CLIC5Q9NZA1 410 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 NUDT5Q9UKK9 219 aa14.79□□□□□ -0.04
LINC00887-204ENST00000456816 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 C2orf78A6NCI8 922 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 SIGLEC16A6NMB1 481 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 PAPLNO95428 1278 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 CKMP06732 381 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 ZDHHC11BP0C7U3 371 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 DDX6P26196 483 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 GBP2P32456 591 aaPredicted RBP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 AVPR1AP37288 418 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 NOP2P46087 812 aaKnown RBP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 PGFP49763 221 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 EFEMP1Q12805 493 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 CBX2Q14781 532 aaPredicted RBP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 PRSS36Q5K4E3 855 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 PLEKHA7Q6IQ23 1121 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 DEFB106AQ8N104 65 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 EMC1Q8N766 993 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 TTC16Q8NEE8 873 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 ZNF564Q8TBZ8 553 aaPredicted RBP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 FAM204AQ9H8W3 233 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 OSER1Q9NX31 292 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 RASAL2Q9UJF2 1139 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 STAP1Q9ULZ2 295 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 NAALADL1Q9UQQ1 740 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 REXO2Q9Y3B8 237 aaKnown RBP14.78□□□□□ -0.04
LINC00887-204ENST00000456816 ADGRG1Q9Y653 693 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 MYO16Q9Y6X6 1858 aa14.78□□□□□ -0.04
LINC00887-204ENST00000456816 SYNJ2BP-COX16A0A087WUM0 186 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.05
LINC00887-204ENST00000456816 PDGFRAP16234 1089 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 HDCP19113 662 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 GPD1P21695 349 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 SDC4P31431 198 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 ATP5C1P36542 298 aaKnown RBP14.77□□□□□ -0.05
LINC00887-204ENST00000456816 MATKP42679 507 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 SULT1E1P49888 294 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 TUBP50607 506 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 KIF5AQ12840 1032 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 STXBP5Q5T5C0 1151 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 MIB1Q86YT6 1006 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 RHOT2Q8IXI1 618 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 ARL14EPQ8N8R7 260 aaPredicted RBP14.77□□□□□ -0.05
LINC00887-204ENST00000456816 JOSD2Q8TAC2 188 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 RFFLQ8WZ73 363 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 SLC2A13Q96QE2 648 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 TSGA10Q9BZW7 698 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 POMKQ9H5K3 350 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 TASP1Q9H6P5 420 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 COX16Q9P0S2 106 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 UVRAGQ9P2Y5 699 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 ZMYM5Q9UJ78 669 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 DNMT3LQ9UJW3 386 aa14.77□□□□□ -0.05
LINC00887-204ENST00000456816 ANAPC7Q9UJX3 599 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms