RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 ESYT2A0FGR8 921 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 IPO5O00410 1097 aaKnown RBP6.86□□□□□ -1.31
COMMD3-204ENST00000456711 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
COMMD3-204ENST00000456711 CILPO75339 1184 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 HNRNPLP14866 589 aaKnown RBP eCLIP6.86□□□□□ -1.31
COMMD3-204ENST00000456711 SREBF1P36956 1147 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 DNM2P50570 870 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 EFEMP1Q12805 493 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 CEP55Q53EZ4 464 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 SLC8B1Q6J4K2 584 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 ANKS3Q6ZW76 656 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 RHPN2Q8IUC4 686 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 TICAM1Q8IUC6 712 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 SLC41A1Q8IVJ1 513 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 ITPRIPQ8IWB1 547 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 MFSD4AQ8N468 514 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 CD101Q93033 1021 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 UBE2FQ969M7 185 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 NLRP4Q96MN2 994 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 POLR3CQ9BUI4 534 aaPredicted RBP6.86□□□□□ -1.31
COMMD3-204ENST00000456711 EIF2AQ9BY44 585 aaKnown RBP6.86□□□□□ -1.31
COMMD3-204ENST00000456711 EBF3Q9H4W6 596 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 GAREM1Q9H706 876 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 IFT122Q9HBG6 1241 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 NRBP2Q9NSY0 501 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 GABBR1Q9UBS5 961 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 TMEM59LQ9UK28 342 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 PCDHA6Q9UN73 950 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.86□□□□□ -1.31
COMMD3-204ENST00000456711 BTBD3Q9Y2F9 522 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 PCDHA8Q9Y5H6 950 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 ICE1Q9Y2F5 2266 aa6.86□□□□□ -1.31
COMMD3-204ENST00000456711 ANO9A1A5B4 782 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 CASTOR2A6NHX0 329 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 K7ENP7 123 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 MEIS1O00470 390 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 SEMA7AO75326 666 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 SLITRK5O94991 958 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 PRAMEF12O95522 483 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 CER1O95813 267 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 PRKCBP05771 671 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 GNSP15586 552 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 ITGB6P18564 788 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 GJA4P35212 333 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 MATKP42679 507 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 CLDN6P56747 220 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 TWF1Q12792 350 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 TUSC3Q13454 348 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 UBE2SQ16763 222 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 RPS26P11Q5JNZ5 115 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-204ENST00000456711 ZKSCAN2Q63HK3 967 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 TRIM68Q6AZZ1 485 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 INO80CQ6PI98 192 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-204ENST00000456711 DHX40Q8IX18 779 aaKnown RBP6.85□□□□□ -1.31
COMMD3-204ENST00000456711 CCDC33Q8N5R6 958 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 TRIML1Q8N9V2 468 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 ENGASEQ8NFI3 743 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 PIBF1Q8WXW3 757 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 HIC2Q96JB3 615 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 LRRC3Q9BY71 257 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 PSTPIP2Q9H939 334 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 BCCIPQ9P287 314 aaKnown RBP eCLIP6.85□□□□□ -1.31
COMMD3-204ENST00000456711 SUCLA2Q9P2R7 463 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-204ENST00000456711 PCDHA10Q9Y5I2 948 aa6.85□□□□□ -1.31
COMMD3-204ENST00000456711 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
COMMD3-204ENST00000456711 CSMD1Q96PZ7 3565 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
COMMD3-204ENST00000456711 IGKV6-21A0A0C4DH24 114 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 OVOL3O00110 214 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 KLK10O43240 276 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 HMMRO75330 724 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 CDK4P11802 303 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 ARSAP15289 507 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 TKTP29401 623 aaKnown RBP6.84□□□□□ -1.31
COMMD3-204ENST00000456711 PTH1RQ03431 593 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 TARBP2Q15633 366 aaKnown RBP6.84□□□□□ -1.31
COMMD3-204ENST00000456711 IFIT1BQ5T764 474 aaKnown RBP6.84□□□□□ -1.31
COMMD3-204ENST00000456711 TSHZ3Q63HK5 1081 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 TPGS2Q68CL5 300 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 USP49Q70CQ1 688 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 SRGAP1Q7Z6B7 1085 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 SMAP1Q8IYB5 467 aaPredicted RBP6.84□□□□□ -1.31
COMMD3-204ENST00000456711 HACE1Q8IYU2 909 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 FAM9BQ8IZU0 186 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 HMGB4Q8WW32 186 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 KCNE4Q8WWG9 221 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 DPH1Q9BZG8 443 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 NXF3Q9H4D5 531 aaKnown RBP6.84□□□□□ -1.31
COMMD3-204ENST00000456711 MINDY3Q9H8M7 445 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 NPHS2Q9NP85 383 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 GMIPQ9P107 970 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 ZSWIM5Q9P217 1185 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 PCDHGA1Q9Y5H4 931 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 CAPN6Q9Y6Q1 641 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 OTOGQ6ZRI0 2925 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 DNHD1Q96M86 4753 aa6.84□□□□□ -1.31
COMMD3-204ENST00000456711 SPTBN1Q01082 2364 aaKnown RBP6.83□□□□□ -1.32
COMMD3-204ENST00000456711 A0A1B0GTW7 788 aa6.83□□□□□ -1.32
COMMD3-204ENST00000456711 K7EQS6 105 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms