RNA–Protein interactions for RNA: ENST00000456627.1

LINC00355-201, long intergenic non-protein coding RNA 355, humanhuman

TSL 2 BASIC

Gene LINC00355, Length 1,878 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00355-201ENST00000456627 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 TNFRSF10BO14763 440 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 FGF18O76093 207 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 FYNP06241 537 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CD48P09326 243 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CDH6P55285 790 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 DYNLT1P63172 113 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 HTRA4P83105 476 aaPredicted RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 DSG1Q02413 1049 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 DEUP1Q05D60 604 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 SMARCB1Q12824 385 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 SNX1Q13596 522 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 PM20D1Q6GTS8 502 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 PRELID2Q8N945 189 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 C1orf54Q8WWF1 131 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 IRGQQ8WZA9 623 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 HERVK_113Q902F9 699 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 C8orf48Q96LL4 319 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 RAD9AQ99638 391 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 NCAPGQ9BPX3 1015 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 FAM118BQ9BPY3 351 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CLSTN3Q9BQT9 956 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 HERC2P3Q9BVR0 1158 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 AMACRQ9UHK6 382 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 USP3Q9Y6I4 520 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 LCHNA4D1U4 455 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CARNS1A5YM72 827 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 FSCN2O14926 492 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 RAD51CO43502 376 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 TJP3O95049 919 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 VNN2O95498 520 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 HAPLN1P10915 354 aaPredicted RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 KDELR1P24390 212 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CDKN2BP42772 138 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 BOLA3Q53S33 107 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 ZC3H12AQ5D1E8 599 aaKnown RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 PPP6R3Q5H9R7 873 aaPredicted RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 BTBD8Q5XKL5 378 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 STRADAQ7RTN6 431 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 BHLHA9Q7RTU4 235 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 ZDHHC14Q8IZN3 488 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CMASQ8NFW8 434 aaPredicted RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 MAIP1Q8WWC4 291 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 SLC9A7Q96T83 725 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 NPY6RQ99463 290 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 C11orf84Q9BUA3 381 aaPredicted RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 SNRNP25Q9BV90 132 aaKnown RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 MRPL17Q9NRX2 175 aaKnown RBP13.38□□□□□ -0.27
LINC00355-201ENST00000456627 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
LINC00355-201ENST00000456627 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 PHF2O75151 1096 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
LINC00355-201ENST00000456627 COPS2P61201 443 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 USP46P62068 366 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 RPL10AP62906 217 aaKnown RBP13.37□□□□□ -0.27
LINC00355-201ENST00000456627 ADCY2Q08462 1091 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 DENND5BQ6ZUT9 1274 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 CYP4V2Q6ZWL3 525 aaPredicted RBP13.37□□□□□ -0.27
LINC00355-201ENST00000456627 RFX6Q8HWS3 928 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 CCDC185Q8N715 623 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 C2orf15Q8WU43 125 aaKnown RBP13.37□□□□□ -0.27
LINC00355-201ENST00000456627 HAUS1Q96CS2 278 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 DHX35Q9H5Z1 703 aaKnown RBP13.37□□□□□ -0.27
LINC00355-201ENST00000456627 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
LINC00355-201ENST00000456627 PTPRDP23468 1912 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
LINC00355-201ENST00000456627 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 A0A1W2PQH9 124 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 C3orf70A6NLC5 250 aaPredicted RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 HEXIM1O94992 359 aaKnown RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 CTNNB1P35222 781 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 PGFP49763 221 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 DR1Q01658 176 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 GUCY2DQ02846 1103 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 MTMR3Q13615 1198 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 GLE1Q53GS7 698 aaKnown RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 OTUD1Q5VV17 481 aaPredicted RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 CCDC137Q6PK04 289 aaKnown RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 MAP7D3Q8IWC1 876 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 FBXO32Q969P5 355 aa13.36□□□□□ -0.27
LINC00355-201ENST00000456627 MAK16Q9BXY0 300 aaKnown RBP13.36□□□□□ -0.27
LINC00355-201ENST00000456627 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms