RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 XPNPEP1Q9NQW7 623 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 DDX56Q9NY93 547 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 SLC9A2Q9UBY0 812 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 TDRKHQ9Y2W6 561 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 DENRO43583 198 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 ADCY3O60266 1144 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 NLRP11P59045 1033 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PLOD1Q02809 727 aaPredicted RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PIGHQ14442 188 aaPredicted RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 CNGA3Q16281 694 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 FAXCQ5TGI0 409 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 HHIPL2Q6UWX4 724 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 ADGRF2Q8IZF7 708 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PHTF2Q8N3S3 785 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PPP1R14CQ8TAE6 165 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 RIN3Q8TB24 985 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PIWIL2Q8TC59 973 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 TFB1MQ8WVM0 346 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 JADE3Q92613 823 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 MRPL1Q9BYD6 325 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 THAP1Q9NVV9 213 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 TJP2Q9UDY2 1190 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PCSK1NQ9UHG2 260 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 APOBEC2Q9Y235 224 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 TELO2Q9Y4R8 837 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF541Q9H0D2 1346 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 BTBD19C9JJ37 291 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 STRNO43815 780 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 LRCH4O75427 683 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 CRTAMO95727 393 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 GSRP00390 522 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 SRGAP2CP0DJJ0 459 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 SRGAP2BP0DMP2 458 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TSHRP16473 764 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 MSX2P35548 267 aaPredicted RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 RPL10AP62906 217 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 COG7P83436 770 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 ACAP1Q15027 740 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 FASTKD1Q53R41 847 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 ZBTB41Q5SVQ8 909 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 C6orf52Q5T4I8 152 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TRMT10BQ6PF06 316 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 BBS12Q6ZW61 710 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 ANO5Q75V66 913 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TAS1R3Q7RTX0 852 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 RTKN2Q8IZC4 609 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 FBXW8Q8N3Y1 598 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 WDTC1Q8N5D0 677 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF513Q8N8E2 541 aaPredicted RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 SPATA18Q8TC71 538 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 COA1Q9GZY4 146 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 LIN28AQ9H9Z2 209 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 AGO4Q9HCK5 861 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 FBXO28Q9NVF7 368 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 PNPOQ9NVS9 261 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TMOD2Q9NZR1 351 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 ZC3H7BQ9UGR2 993 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 DMTF1Q9Y222 760 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 SIPA1L1O43166 1804 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 PEX1O43933 1283 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TRMUO75648 421 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 NCF2P19878 526 aaPredicted RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 KDELR1P24390 212 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 PSMA2P25787 234 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 L1CAMP32004 1257 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 YWHAZP63104 245 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 DCTN2Q13561 401 aaKnown RBP10.68□□□□□ -0.7
CLIP4-208ENST00000456385 KCNJ11Q14654 390 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 C1QTNF12Q5T7M4 302 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 KLHL35Q6PF15 583 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TSHZ1Q6ZSZ6 1077 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 TRIM67Q6ZTA4 783 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 RFX6Q8HWS3 928 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 PQLC1Q8N2U9 271 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 CCDC33Q8N5R6 958 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 EMC1Q8N766 993 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 JOSD2Q8TAC2 188 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 FAF2Q96CS3 445 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 ARHGEF38Q9NXL2 777 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 BTBD7Q9P203 1132 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 SORCS3Q9UPU3 1222 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 AP4B1Q9Y6B7 739 aa10.68□□□□□ -0.7
CLIP4-208ENST00000456385 SUPT3HO75486 399 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 TRPA1O75762 1119 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 BBOX1O75936 387 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 KLHL2O95198 593 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MAP3K6O95382 1288 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 ARRB2P32121 409 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 IDH3AP50213 366 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 SULT2A1Q06520 285 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 CDK18Q07002 472 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 MMRN1Q13201 1228 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 TKFCQ3LXA3 575 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 TEDDM1Q5T9Z0 273 aa10.67□□□□□ -0.7
CLIP4-208ENST00000456385 LRRC8BQ6P9F7 803 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms