RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 PREPLQ4J6C6 727 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 TRMT11Q7Z4G4 463 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 C12orf56Q8IXR9 622 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SMARCD1Q96GM5 515 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SMOQ99835 787 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SLC39A2Q9NP94 309 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 IGHV1OR15-9A0A0B4J2B8 117 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 LRRIQ3A6PVS8 624 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 TLR5O60602 858 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 EXOC3O60645 756 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 VNN1O95497 513 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SERPINF2P08697 491 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 HOXB2P14652 356 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 CLDN10P78369 228 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SIM1P81133 766 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 ZNF33AQ06730 810 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 BIRC3Q13489 604 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 NCOA4Q13772 614 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 ZNF699Q32M78 642 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 ZNF667Q5HYK9 610 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 EGFLAMQ63HQ2 1017 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 CEP76Q8TAP6 659 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 PARD3BQ8TEW8 1205 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 ACOX2Q99424 681 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 CAPN10Q9HC96 672 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 NEUROG3Q9Y4Z2 214 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 PLXND1Q9Y4D7 1925 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 SRRM3A6NNA2 597 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-206ENST00000456380 POLR2DO15514 142 aaKnown RBP13.11□□□□□ -0.31
TRA2B-206ENST00000456380 CUTAO60888 179 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 CCDC130P13994 396 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-206ENST00000456380 FAM193AP78312 1265 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-206ENST00000456380 ORC1Q13415 861 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 SLC41A1Q8IVJ1 513 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 OR2I1PQ8NGU4 316 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 KLF16Q9BXK1 252 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-206ENST00000456380 NACA2Q9H009 215 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 CSNK1G1Q9HCP0 422 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
TRA2B-206ENST00000456380 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
TRA2B-206ENST00000456380 PRRT4C9JH25 899 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 NDUFV2P19404 249 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 CUL4BQ13620 913 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 GRAMD4Q6IC98 578 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 CHPFQ8IZ52 775 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 HDDC3Q8N4P3 179 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 SLC2A14Q8TDB8 520 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
TRA2B-206ENST00000456380 CD93Q9NPY3 652 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 OSER1Q9NX31 292 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 HMGXB4Q9UGU5 601 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 MSRB2Q9Y3D2 182 aa13.1□□□□□ -0.31
TRA2B-206ENST00000456380 FASNP49327 2511 aaKnown RBP13.1□□□□□ -0.31
TRA2B-206ENST00000456380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-206ENST00000456380 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 CACNG3O60359 315 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 ZNF217O75362 1048 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 CLSTN1O94985 981 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 YEATS4O95619 227 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-206ENST00000456380 TYRP14679 529 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 NDST1P52848 882 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 AP3M2P53677 418 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 DLG4P78352 724 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 TPGS1Q6ZTW0 290 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 ZCCHC14Q8WYQ9 949 aaKnown RBP13.09□□□□□ -0.31
TRA2B-206ENST00000456380 GABRG3Q99928 467 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 BBS2Q9BXC9 721 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
TRA2B-206ENST00000456380 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
TRA2B-206ENST00000456380 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms