RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SCN1AP35498 2009 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ALDH18A1P54886 795 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 UBXN2AP68543 259 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DSG1Q02413 1049 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GABPAQ06546 454 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 STRN3Q13033 797 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DCTN2Q13561 401 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 LPIN1Q14693 890 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PPM1JQ5JR12 505 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 KRT79Q5XKE5 535 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC39A4Q6P5W5 647 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ADGRD1Q6QNK2 874 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ANO5Q75V66 913 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ADGRG6Q86SQ4 1221 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 LSRQ86X29 649 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PASD1Q8IV76 773 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MAP7D3Q8IWC1 876 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GALNT4Q8N4A0 578 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ATP6V1E2Q96A05 226 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 KLQ9UEF7 1012 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ANAPC5Q9UJX4 755 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ATF5Q9Y2D1 282 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SNCAIPQ9Y6H5 919 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 RTL9Q8NET4 1388 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DDX60LQ5H9U9 1706 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 LOC102724428A0A0B4J2F2 783 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CCDC195A0A1B0GUA6 201 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 C3orf70A6NLC5 250 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ALDH1A2O94788 518 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 EDN1P05305 212 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 EEF2P13639 858 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 FGFR3P22607 806 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CYP2C18P33260 490 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TGFBR1P36897 503 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 RASSF2P50749 326 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC18A1P54219 525 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SIK1P57059 783 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 IL9RQ01113 521 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 BMT2Q1RMZ1 405 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SBK1Q52WX2 424 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 C1orf146Q5VVC0 180 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 KAZNQ674X7 775 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 NAPEPLDQ6IQ20 393 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 RNF207Q6ZRF8 634 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CYFIP1Q7L576 1253 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TAOK1Q7L7X3 1001 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TDRPQ86YL5 185 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MPP5Q8N3R9 675 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ZCCHC9Q8N567 271 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 NAT8LQ8N9F0 302 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC35B2Q8TB61 432 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ZCRB1Q8TBF4 217 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CCDC97Q96F63 343 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DCUN1D1Q96GG9 259 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 AGAP3Q96P47 875 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SYNGAP1Q96PV0 1343 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 A0A1W2PRG0 241 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PDXKO00764 312 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 KCNQ2O43526 872 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MTA2O94776 668 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 RAG1P15918 1043 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 RPA1P27694 616 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CIITAP33076 1130 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CDK8P49336 464 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GPC5P78333 572 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 AQP6Q13520 282 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SMTNL2Q2TAL5 461 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GRAMD1BQ3KR37 738 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 Q5BKY6 102 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 AARS2Q5JTZ9 985 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 LAIR2Q6ISS4 152 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PMF1Q6P1K2 205 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 NAPRTQ6XQN6 538 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CYP4V2Q6ZWL3 525 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF534Q76KX8 674 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 EPHX4Q8IUS5 362 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ADGRF4Q8IZF3 695 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 WDTC1Q8N5D0 677 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 VCPIP1Q96JH7 1222 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MBOAT7Q96N66 472 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC39A3Q9BRY0 314 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TSSK1BQ9BXA7 367 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MIR1-1HGQ9H1L0 117 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 VPS11Q9H270 941 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SMOC2Q9H3U7 446 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ACSS3Q9H6R3 686 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MANSC1Q9H8J5 431 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 EPS15L1Q9UBC2 864 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PI4KBQ9UBF8 816 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SERPINA10Q9UK55 444 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 AGO2Q9UKV8 859 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PMF1-BGLAPU3KQ54 211 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TNS1Q9HBL0 1735 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SHANK3Q9BYB0 1731 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 GTPBP10A4D1E9 387 aaKnown RBP4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 MSH4O15457 936 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 SPOPO43791 374 aa4.71□□□□□ -1.65
DEPDC1-202ENST00000456315 ITGAXP20702 1163 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms