RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 C11orf87Q6NUJ2 197 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 TMEM65Q6PI78 240 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 ZNF813Q6ZN06 617 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 RNF44Q7L0R7 432 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 DGKHQ86XP1 1220 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 CNGA4Q8IV77 575 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 KRT78Q8N1N4 520 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 DENND1AQ8TEH3 1009 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 HIST1H2AAQ96QV6 131 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 PNPLA8Q9NP80 782 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 DNAJB11Q9UBS4 358 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 STEAP1Q9UHE8 339 aa4.36□□□□□ -1.71
R3HDM1-212ENST00000456040 CYP2D7A0A087X1C5 515 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 A8MVJ9 347 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 AGPSO00116 658 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 A1BGP04217 495 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 ANXA2P07355 339 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 SNHG28P0DPA3 235 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 ZNF268Q14587 947 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 KCNAB1Q14722 419 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 DAZAP2Q15038 168 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 ST3GAL2Q16842 350 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 TIFAQ96CG3 184 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 ZDHHC12Q96GR4 267 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 WDYHV1Q96HA8 205 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 VPS50Q96JG6 964 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 HS6ST2Q96MM7 605 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 FAM118BQ9BPY3 351 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 APOL5Q9BWW9 433 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 PDGFCQ9NRA1 345 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 TBC1D23Q9NUY8 699 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 RIMKLBQ9ULI2 386 aa4.35□□□□□ -1.71
R3HDM1-212ENST00000456040 RHPN2P1A8MT19 583 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 KCNU1A8MYU2 1149 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 F8W8V4 182 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 DSCR3O14972 297 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 THAP12O43422 761 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 PQBP1O60828 265 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 RNF8O76064 485 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 IL18RAPO95256 599 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 APEHP13798 732 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 NTSR1P30989 418 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 ARHGAP25P42331 645 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 MMP13P45452 471 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 KLF9Q13886 244 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 DAG1Q14118 895 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 CLCA4Q14CN2 919 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 TRIP6Q15654 476 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 MANEALQ5VSG8 457 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 SLC2A7Q6PXP3 512 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 VSTM1Q6UX27 236 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 CLEC9AQ6UXN8 241 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 DCDC5Q6ZRR9 648 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 USP49Q70CQ1 688 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 METTL25Q8N6Q8 603 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 LINC01465Q8N7H1 131 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 C11orf44Q8N8P7 122 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 MAFAQ8NHW3 353 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 IQCDQ96DY2 449 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 FAM227BQ96M60 508 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 EFHD1Q9BUP0 239 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 DDX21Q9NR30 783 aaKnown RBP eCLIP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 GAR1Q9NY12 217 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 ZNF580Q9UK33 172 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 HPSEQ9Y251 543 aa4.34□□□□□ -1.71
R3HDM1-212ENST00000456040 TP73O15350 636 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 BCAR3O75815 825 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 RBL1P28749 1068 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 MCM5P33992 734 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 PLCD1P51178 756 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 EIF4A1P60842 406 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 HTRA4P83105 476 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 CFHR3Q02985 330 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 LARS2Q15031 903 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 ETFDHQ16134 617 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 MEX3CQ5U5Q3 659 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 C12orf76Q8N812 135 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 PNPLA1Q8N8W4 532 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 PRSS3P2Q8NHM4 247 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 CHMP4AQ9BY43 222 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 HEYLQ9NQ87 328 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 TUBA8Q9NY65 449 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 KLHL13Q9P2N7 655 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 VPS51Q9UID3 782 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 MAFFQ9ULX9 164 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 CORO2BQ9UQ03 480 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 SLC27A6Q9Y2P4 619 aa4.33□□□□□ -1.72
R3HDM1-212ENST00000456040 COL15A1P39059 1388 aa4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 INSIG1O15503 277 aa4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 MOSPD3O75425 235 aa4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 TMEM225BP0DP42 221 aa4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 SFPQP23246 707 aaKnown RBP eCLIP4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 ATP5F1P24539 256 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 ADRA1DP25100 572 aa4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 COPAP53621 1224 aa4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 FOXG1P55316 489 aaPredicted RBP4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 TXNL4AP83876 142 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-212ENST00000456040 KCNB1Q14721 858 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms