RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SPATA2LQ8IUW3 424 aaPredicted RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 FMNL3Q8IVF7 1028 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 PRPF38AQ8NAV1 312 aaKnown RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 BPIFB1Q8TDL5 484 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 JDP2Q8WYK2 163 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 PPP2R3CQ969Q6 453 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 MIB2Q96AX9 1013 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CTHRC1Q96CG8 243 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 MTMR8Q96EF0 704 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 SLC35A4Q96G79 324 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 MED30Q96HR3 178 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 HIC2Q96JB3 615 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 SCNM1Q9BWG6 230 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 GBA2Q9HCG7 927 aaPredicted RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 SARS2Q9NP81 518 aaKnown RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 TYW1Q9NV66 732 aaKnown RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 MGAT4CQ9UBM8 478 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 WASHC2CQ9Y4E1 1318 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 C2CD4BA6NLJ0 364 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 TNFRSF13BO14836 293 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 SPTLC2O15270 562 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 GRID2O43424 1007 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 SPRY2O43597 315 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 TLX3O43711 291 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 CAMTA2O94983 1202 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 NDUFB8O95169 186 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 MAP4K4O95819 1239 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 THP07101 528 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 CCND1P24385 295 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 TBXAS1P24557 533 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 BCAT1P54687 386 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 RRP1P56182 461 aaKnown RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 RPL36AP83881 106 aaKnown RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 PPATQ06203 517 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 MFSD13AQ14CX5 517 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 PFKFB3Q16875 520 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 FAM110CQ1W6H9 321 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 PLA1AQ53H76 456 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 CCDC157Q569K6 752 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 BRDTQ58F21 947 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 EARS2Q5JPH6 523 aaKnown RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 CATIPQ7Z7H3 387 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 COL23A1Q86Y22 540 aaPredicted RBP2.69□□□□□ -1.98
LINC02540-201ENST00000455554 SPARTQ8N0X7 666 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 IQCF1Q8N6M8 205 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 PLBD2Q8NHP8 589 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 NEUROG1Q92886 237 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 SLITRK1Q96PX8 696 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 TUBB6Q9BUF5 446 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 COG5Q9UP83 839 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 USP22Q9UPT9 525 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 MED16Q9Y2X0 877 aa2.69□□□□□ -1.98
LINC02540-201ENST00000455554 TMEM272A0A1B0GTI8 110 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 ZNF814B7Z6K7 855 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 HOXB2P14652 356 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 PRKAR1BP31321 381 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 POLD2P49005 469 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 MTHFSP49914 203 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 GAS1P54826 345 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 P2RX3P56373 397 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 PGS1Q32NB8 556 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 PTCHD3Q3KNS1 767 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 ODF3L2Q3SX64 289 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 NPNTQ6UXI9 565 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 FAM57BQ71RH2 274 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 RAVER1Q8IY67 606 aaKnown RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 TMEM199Q8N511 208 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 DNAJC5GQ8N7S2 189 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 JPH3Q8WXH2 748 aaPredicted RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 MTFMTQ96DP5 389 aaKnown RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 TRMT61AQ96FX7 289 aaKnown RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 VN1R3Q9BXE9 311 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 GTPBP4Q9BZE4 634 aaKnown RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 CD93Q9NPY3 652 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 ZSCAN32Q9NX65 697 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 MSRB1Q9NZV6 116 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 GABBR1Q9UBS5 961 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 PCDHA7Q9UN72 937 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 PCDHA12Q9UN75 941 aa2.68□□□□□ -1.98
LINC02540-201ENST00000455554 THRAP3Q9Y2W1 955 aaKnown RBP2.68□□□□□ -1.98
LINC02540-201ENST00000455554 A0A087WWL8 130 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 AKAP10O43572 662 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 ZC3H11AO75152 810 aaKnown RBP eCLIP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 PEX14O75381 377 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 PLGP00747 810 aaPredicted RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 PLAUP00749 431 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 ALDH2P05091 517 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 EPHA3P29320 983 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 RECQLP46063 649 aaPredicted RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 ENTPD1P49961 510 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 LTBQ06643 244 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 PTGR1Q14914 329 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 OTUD3Q5T2D3 398 aaPredicted RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 SLC15A4Q8N697 577 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 C12orf76Q8N812 135 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms