RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 LHX5Q9H2C1 402 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
HDAC4-205ENST00000454542 GKN1Q9NS71 199 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 SMPD4Q9NXE4 827 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 CFAP97Q9P2B7 532 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 NAGPAQ9UK23 515 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 WNT6Q9Y6F9 365 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 F5P12259 2224 aa14.88□□□□□ -0.03
HDAC4-205ENST00000454542 YJEFN3A6XGL0 299 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 E7ENQ6 273 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 SPECC1L-ADORA2AF8WAN1 911 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 MAN2B1O00754 1011 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 PI15O43692 258 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 FBXO21O94952 628 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 TBX18O95935 607 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 RALAP11233 206 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 CDK11BP21127 795 aaKnown RBP14.87□□□□□ -0.03
HDAC4-205ENST00000454542 ATP5C1P36542 298 aaKnown RBP14.87□□□□□ -0.03
HDAC4-205ENST00000454542 USP8P40818 1118 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 SOX9P48436 509 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 IFNAR2P48551 515 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 UBXN1Q04323 297 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 FZD5Q13467 585 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 GAB4Q2WGN9 574 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 CC2D1AQ6P1N0 951 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-205ENST00000454542 MSANTD2Q6P1R3 559 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 TXNDC11Q6PKC3 985 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 ZNF852Q6ZMS4 543 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 TADA2BQ86TJ2 420 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 TMEM110Q86TL2 294 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 EPS8L1Q8TE68 723 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 DDX1Q92499 740 aaKnown RBP14.87□□□□□ -0.03
HDAC4-205ENST00000454542 ATP2A3Q93084 1043 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 WBP2Q969T9 261 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 CLDN23Q96B33 292 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 EBF3Q9H4W6 596 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 FAM207AQ9NSI2 230 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-205ENST00000454542 DUS2Q9NX74 493 aaKnown RBP14.87□□□□□ -0.03
HDAC4-205ENST00000454542 DNMT3LQ9UJW3 386 aa14.87□□□□□ -0.03
HDAC4-205ENST00000454542 MDM4O15151 490 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 CYP11B1P15538 503 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 MAGEA9P43362 315 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 ACADSBP45954 432 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 BPIFB4P59827 614 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 POLR2FP61218 127 aaKnown RBP14.86□□□□□ -0.03
HDAC4-205ENST00000454542 Q6ZNB5 142 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 LUZP1Q86V48 1076 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 CPA6Q8N4T0 437 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 CLEC4CQ8WTT0 213 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 NDRG1Q92597 394 aaKnown RBP14.86□□□□□ -0.03
HDAC4-205ENST00000454542 OTUB2Q96DC9 234 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 ECT2Q9H8V3 914 aa14.86□□□□□ -0.03
HDAC4-205ENST00000454542 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
HDAC4-205ENST00000454542 ARIH1Q9Y4X5 557 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-205ENST00000454542 A0A1W2PQC6 194 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 E5RJQ4 531 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 SLC9A3R1O14745 358 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 TEX33O43247 280 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 SART1O43290 800 aaKnown RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 NFATC1O95644 943 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 CYP17A1P05093 508 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 LCP1P13796 627 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 COL9A1P20849 921 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 CD72P21854 359 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 RPS9P46781 194 aaKnown RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 C10orf120Q5SQS8 335 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 BSPRYQ5W0U4 402 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 HTR3DQ70Z44 454 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 C1orf131Q8NDD1 294 aaKnown RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 NEK11Q8NG66 645 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 FAM3CQ92520 227 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 NELL2Q99435 816 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 NACA2Q9H009 215 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 OLA1Q9NTK5 396 aaKnown RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 TBC1D14Q9P2M4 693 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 NUDT5Q9UKK9 219 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 MRPS17Q9Y2R5 130 aaKnown RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 SIT1Q9Y3P8 196 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 HCN4Q9Y3Q4 1203 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 MTF2Q9Y483 593 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-205ENST00000454542 MUC6Q6W4X9 2439 aa14.85□□□□□ -0.03
HDAC4-205ENST00000454542 GALR2O43603 387 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-205ENST00000454542 STC2O76061 302 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 LTFP02788 710 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 GJA4P35212 333 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 SOX5P35711 763 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 KPNA1P52294 538 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-205ENST00000454542 UBXN2BQ14CS0 331 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 PTPN20Q4JDL3 420 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 NOP9Q86U38 636 aaKnown RBP14.84□□□□□ -0.03
HDAC4-205ENST00000454542 ZNF677Q86XU0 584 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 PASD1Q8IV76 773 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 BBS7Q8IWZ6 715 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 PRSS33Q8NF86 280 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-205ENST00000454542 CPXM1Q96SM3 734 aa14.84□□□□□ -0.03
HDAC4-205ENST00000454542 PRRX2Q99811 253 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms