RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 GINS2Q9Y248 185 aa9.12□□□□□ -0.95
HCG18-240ENST00000454269 MTF2Q9Y483 593 aaPredicted RBP9.12□□□□□ -0.95
HCG18-240ENST00000454269 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 WDR17Q8IZU2 1322 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 PTP4A3O75365 173 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SUN1O94901 812 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CKBP12277 381 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CCNE1P24864 410 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 RRM2P31350 389 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CACNB3P54284 484 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 BEX3Q00994 111 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SELENBP1Q13228 472 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 AGAP7PQ5VUJ5 663 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 RIC3Q7Z5B4 369 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CAMKK1Q8N5S9 505 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 MINDY2Q8NBR6 621 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SLC4A11Q8NBS3 891 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 PIK3C3Q8NEB9 887 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SSH3Q8TE77 659 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 AK8Q96MA6 479 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 MFSD14AQ96MC6 490 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SLC13A1Q9BZW2 595 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 DDX47Q9H0S4 455 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SYBUQ9NX95 663 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CNOT8Q9UFF9 292 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 SIK3Q9Y2K2 1263 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 MTSS1O43312 755 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CTNND1O60716 968 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 DNAJC6O75061 913 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 TFAP2AP05549 437 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 KRT3P12035 628 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 EPB42P16452 691 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 PON1P27169 355 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 NOS3P29474 1203 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 TALDO1P37837 337 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 ARL1P40616 181 aaPredicted RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 SULT1E1P49888 294 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CASP5P51878 434 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 NPEPPSP55786 919 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 C21orf59P57076 290 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 PUM3Q15397 648 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 UGP2Q16851 508 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SPATS1Q496A3 300 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 CERKLQ49MI3 558 aaPredicted RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 SCUBE3Q8IX30 993 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 KBTBD2Q8IY47 623 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 TTC8Q8TAM2 541 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 KBTBD7Q8WVZ9 684 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 SHC3Q92529 594 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 HDAC2Q92769 488 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 TP53INP1Q96A56 240 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 HEXIM2Q96MH2 286 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 WRNIP1Q96S55 665 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 ELAC2Q9BQ52 826 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 FERMT1Q9BQL6 677 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 HERPUD2Q9BSE4 406 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 MCMBPQ9BTE3 642 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 TRIM45Q9H8W5 580 aaPredicted RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
HCG18-240ENST00000454269 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.11□□□□□ -0.95
HCG18-240ENST00000454269 EXTL2Q9UBQ6 330 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 NFU1Q9UMS0 254 aa9.11□□□□□ -0.95
HCG18-240ENST00000454269 ZSCAN5CA6NGD5 496 aaPredicted RBP9.1□□□□□ -0.95
HCG18-240ENST00000454269 TARM1B6A8C7 271 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 H3BRJ5 948 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 UBXN8O00124 270 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 TAF4O00268 1085 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 LAD1O00515 517 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 KPNA4O00629 521 aaPredicted RBP9.1□□□□□ -0.95
HCG18-240ENST00000454269 TNPO2O14787 897 aaKnown RBP9.1□□□□□ -0.95
HCG18-240ENST00000454269 AKAP10O43572 662 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 PIP5K1CO60331 668 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 PHF2O75151 1096 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 NDUFS6O75380 124 aaKnown RBP9.1□□□□□ -0.95
HCG18-240ENST00000454269 SURF6O75683 361 aaKnown RBP9.1□□□□□ -0.95
HCG18-240ENST00000454269 CALB1P05937 261 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 APOA4P06727 396 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 SMIM18P0DKX4 95 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 MYL4P12829 197 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 TRIM27P14373 513 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 GJB2P29033 226 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 TYK2P29597 1187 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 BMPR1AP36894 532 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 NEK3P51956 506 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 AIF1P55008 147 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 SLC12A2P55011 1212 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 FOLH1Q04609 750 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 CBLBQ13191 982 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 COTL1Q14019 142 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 FAM83BQ5T0W9 1011 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 C9orf131Q5VYM1 1079 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 ARHGAP11AQ6P4F7 1023 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 ALKBH5Q6P6C2 394 aaKnown RBP9.1□□□□□ -0.95
HCG18-240ENST00000454269 RNF19BQ6ZMZ0 732 aa9.1□□□□□ -0.95
HCG18-240ENST00000454269 MACC1Q6ZN28 852 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms