RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 HFE2Q6ZVN8 426 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 IRF2BP2Q7Z5L9 587 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 TADA2BQ86TJ2 420 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 FMNL3Q8IVF7 1028 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 NACA2Q9H009 215 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 TJP2Q9UDY2 1190 aa29.35■■■□□ 2.29
SMARCC1-203ENST00000454240 A0A1W2PQJ5 194 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 LRRC53A6NM62 1247 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 PAPSS1O43252 624 aaPredicted RBP29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 LSM8O95777 96 aaKnown RBP29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 CCDC172P0C7W6 258 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 MTF1Q14872 753 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 C10orf120Q5SQS8 335 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 BTBD8Q5XKL5 378 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 KIAA1958Q8N8K9 716 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 DNASE1L2Q92874 299 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 IQCDQ96DY2 449 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 FAM83CQ9BQN1 747 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 KLF16Q9BXK1 252 aaPredicted RBP29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 ABCC13Q9NSE7 274 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 AIPL1Q9NZN9 384 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 DNMT3LQ9UJW3 386 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 ITIH6Q6UXX5 1313 aa29.34■■■□□ 2.29
SMARCC1-203ENST00000454240 PLCB2Q00722 1185 aa29.33■■■□□ 2.29
SMARCC1-203ENST00000454240 PTPN20Q4JDL3 420 aa29.33■■■□□ 2.29
SMARCC1-203ENST00000454240 DDX42Q86XP3 938 aaKnown RBP eCLIP29.33■■■□□ 2.29
SMARCC1-203ENST00000454240 ZFYVE19Q96K21 471 aa29.33■■■□□ 2.29
SMARCC1-203ENST00000454240 GKN1Q9NS71 199 aa29.33■■■□□ 2.29
SMARCC1-203ENST00000454240 MDM4O15151 490 aa29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 SART1O43290 800 aaKnown RBP29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 LTFP02788 710 aa29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 CYP1A1P04798 512 aaPredicted RBP29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 NOMO3P69849 1222 aa29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 IER5LQ5T953 404 aa29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 SARM1Q6SZW1 724 aa29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 FBXL21Q9UKT6 434 aa29.32■■■□□ 2.28
SMARCC1-203ENST00000454240 TMEM221A6NGB7 291 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 M0R296 226 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 SNX16P57768 344 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 CC2D1AQ6P1N0 951 aaPredicted RBP29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 TTC16Q8NEE8 873 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 OSCP1Q8WVF1 389 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 EDEM1Q92611 657 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 ANP32EQ9BTT0 268 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 C11orf16Q9NQ32 467 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 OLA1Q9NTK5 396 aaKnown RBP29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 CFAP97Q9P2B7 532 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 CAPN11Q9UMQ6 739 aa29.31■■■□□ 2.28
SMARCC1-203ENST00000454240 KRBA1A5PL33 1030 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 AP5Z1O43299 807 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 ERBB2P04626 1255 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 GABRB2P47870 512 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 SLC44A4Q53GD3 710 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 SFMBT2Q5VUG0 894 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 E4F1Q66K89 784 aaPredicted RBP29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 TRIM72Q6ZMU5 477 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 RSRC2Q7L4I2 434 aaKnown RBP29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 PCDHB18PQ96TA0 734 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 AGPAT1Q99943 283 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 CA14Q9ULX7 337 aa29.3■■■□□ 2.28
SMARCC1-203ENST00000454240 E2F8A0AVK6 867 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 GYPCP04921 128 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 FYNP06241 537 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 EFEMP1Q12805 493 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 PDGFRLQ15198 375 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 ASIC2Q16515 512 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 NAA35Q5VZE5 725 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 BEND5Q7L4P6 421 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 ERICH1Q86X53 443 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 IPO4Q8TEX9 1081 aaKnown RBP29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 RNF139Q8WU17 664 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 CPA5Q8WXQ8 436 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 GOLGA1Q92805 767 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 SYT11Q9BT88 431 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 ARHGEF3Q9NR81 526 aa29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 DUS2Q9NX74 493 aaKnown RBP29.29■■■□□ 2.28
SMARCC1-203ENST00000454240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.29■■■□□ 2.282e-10■■□□□ 11.7
SMARCC1-203ENST00000454240 GPR37L1O60883 481 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 UNGP13051 313 aaPredicted RBP29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 PRKCIP41743 596 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 ZBED6P86452 979 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 SPECC1LQ69YQ0 1117 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 TRIM68Q6AZZ1 485 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 MSANTD2Q6P1R3 559 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 FAM183BPQ6ZVS7 135 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 BMP8AQ7Z5Y6 402 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 MIB1Q86YT6 1006 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 SIX5Q8N196 739 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 CSGALNACT1Q8TDX6 532 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 CPLX3Q8WVH0 158 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 WBP2Q969T9 261 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 PIWIL1Q96J94 861 aaKnown RBP29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 C1QTNF1Q9BXJ1 281 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 NUCKS1Q9H1E3 243 aaKnown RBP29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 LINC00597Q9H2U6 94 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 SYNCQ9H7C4 482 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 HPS4Q9NQG7 708 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 HEBP1Q9NRV9 189 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 MARCH2Q9P0N8 246 aa29.28■■■□□ 2.28
SMARCC1-203ENST00000454240 RASAL2Q9UJF2 1139 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms