RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 KLHL2O95198 593 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 TCF7P36402 384 aaPredicted RBP19.31■□□□□ 0.68
PTPA-223ENST00000452489 HSPA13P48723 471 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 TRIM72Q6ZMU5 477 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 PCYOX1LQ8NBM8 494 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.31■□□□□ 0.68
PTPA-223ENST00000452489 CDH7Q9ULB5 785 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 MYRFQ9Y2G1 1151 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 PLLPQ9Y342 182 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 SLIT2O94813 1529 aa19.31■□□□□ 0.68
PTPA-223ENST00000452489 SGK1O00141 431 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 PFDN6O15212 129 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 INHBAP08476 426 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 BTDP43251 543 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 ITGADQ13349 1161 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 IGDCC3Q8IVU1 814 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 PHTF2Q8N3S3 785 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 SLC15A4Q8N697 577 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 PTCD2Q8WV60 388 aaKnown RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 TANKQ92844 425 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 HPS1Q92902 700 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 XAB2Q9HCS7 855 aaKnown RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 VPS45Q9NRW7 570 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 OLAHQ9NV23 265 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 DMAC2Q9NW81 257 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 GID8Q9NWU2 228 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 POU2F3Q9UKI9 436 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 AFG3L2Q9Y4W6 797 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 SCINQ9Y6U3 715 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 TCRBV7S3A2A0A539 114 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 ARHGEF37A1IGU5 675 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 TRIM49D1C9J1S8 452 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 L1CAMP32004 1257 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 CLK2P49760 499 aaKnown RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 SPIRE1Q08AE8 756 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 SETD3Q86TU7 594 aaPredicted RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 KBTBD7Q8WVZ9 684 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 KCNK16Q96T55 309 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 GNPTGQ9UJJ9 305 aa19.3■□□□□ 0.68
PTPA-223ENST00000452489 FARP1Q9Y4F1 1045 aaPredicted RBP19.3■□□□□ 0.68
PTPA-223ENST00000452489 GRIN3BO60391 1043 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 CD1EP15812 388 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 MZF1P28698 734 aaPredicted RBP19.29■□□□□ 0.68
PTPA-223ENST00000452489 PLEKHA7Q6IQ23 1121 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 TRPC4APQ8TEL6 797 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 USP33Q8TEY7 942 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 RMND5BQ96G75 393 aaPredicted RBP19.29■□□□□ 0.68
PTPA-223ENST00000452489 PCIF1Q9H4Z3 704 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 RPF2Q9H7B2 306 aaKnown RBP19.29■□□□□ 0.68
PTPA-223ENST00000452489 APOBEC2Q9Y235 224 aaKnown RBP19.29■□□□□ 0.68
PTPA-223ENST00000452489 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 COL4A1P02462 1669 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 ANKRD34BA5PLL1 514 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 A6NL46 340 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 H3BMQ9 156 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 ZC3H11AO75152 810 aaKnown RBP eCLIP19.29■□□□□ 0.687e-6■■■□□ 18.7
PTPA-223ENST00000452489 FAM13AO94988 1023 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 ATP5BP06576 529 aaKnown RBP19.29■□□□□ 0.68
PTPA-223ENST00000452489 KLRK1P26718 216 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 GNA12Q03113 381 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 CDK18Q07002 472 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 PPP2R5DQ14738 602 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 ZFYVE27Q5T4F4 411 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 SUSD4Q5VX71 490 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 LYSMD3Q7Z3D4 306 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 RHOT1Q8IXI2 618 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 FAM84BQ96KN1 310 aaPredicted RBP19.29■□□□□ 0.68
PTPA-223ENST00000452489 COG8Q96MW5 612 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 ERGIC3Q9Y282 383 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 DNAJC16Q9Y2G8 782 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 ADAMTSL3P82987 1691 aa19.29■□□□□ 0.68
PTPA-223ENST00000452489 TISP43B9A030 160 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 PLOD2O00469 737 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 GIPC1O14908 333 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 EIF3DO15371 548 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTPA-223ENST00000452489 ENTPD3O75355 529 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 TOP3BO95985 862 aaKnown RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 NFX1Q12986 1120 aaKnown RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 ZBTB17Q13105 803 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 STX3Q13277 289 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 FLOT2Q14254 428 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 PARP10Q53GL7 1025 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 CAVIN4Q5BKX8 364 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 AARS2Q5JTZ9 985 aaKnown RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 MAVSQ7Z434 540 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 SLC44A1Q8WWI5 657 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 CPA5Q8WXQ8 436 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 CPT1BQ92523 772 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 DHX38Q92620 1227 aaKnown RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 CDH19Q9H159 772 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 ARFGEF1Q9Y6D6 1849 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 TCRBV9S1A1TA0A576 114 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 TCF4P15884 667 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 ZNF26P17031 533 aaPredicted RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 ADRA2BP18089 450 aa19.28■□□□□ 0.68
PTPA-223ENST00000452489 XRCC1P18887 633 aaPredicted RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 NCF2P19878 526 aaPredicted RBP19.28■□□□□ 0.68
PTPA-223ENST00000452489 NFIL3Q16649 462 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms