RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 STIM1Q13586 685 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 CUL2Q13617 745 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 PUM1Q14671 1186 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPSF4-208ENST00000452047 RSPO4Q2I0M5 234 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-208ENST00000452047 C2orf27AQ580R0 203 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 RAB41Q5JT25 222 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 HTR3DQ70Z44 454 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 TTC30AQ86WT1 665 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 TMEM25Q86YD3 366 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 ZNF276Q8N554 614 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 UBR7Q8N806 425 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 CEP63Q96MT8 703 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 SPHK2Q9NRA0 654 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 MMP17Q9ULZ9 603 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 USP18Q9UMW8 372 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 MYO18AQ92614 2054 aaKnown RBP13.14□□□□□ -0.31
CPSF4-208ENST00000452047 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 MDM4O15151 490 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 PMM2O15305 246 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 APODP05090 189 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 GRIA2P42262 883 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 KIR2DL1P43626 348 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 FMO5P49326 533 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 PSEN1P49768 467 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 MRPS21P82921 87 aaKnown RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 GAD2Q05329 585 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 KDSRQ06136 332 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 MORC3Q14149 939 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 KBTBD6Q86V97 674 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 PIGZQ86VD9 579 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 RASSF3Q86WH2 238 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 IL17RCQ8NAC3 791 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 METTL14Q9HCE5 456 aaKnown RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 ARHGEF4Q9NR80 690 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 SEMA4GQ9NTN9 838 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 DNMT3LQ9UJW3 386 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 NAGPAQ9UK23 515 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 NUDT5Q9UKK9 219 aa13.13□□□□□ -0.31
CPSF4-208ENST00000452047 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
CPSF4-208ENST00000452047 PLXND1Q9Y4D7 1925 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 PRR5-ARHGAP8B1AHC4 643 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 TULP3O75386 442 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 CCDC192P0DO97 292 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 HNRNPLP14866 589 aaKnown RBP eCLIP13.12□□□□□ -0.31
CPSF4-208ENST00000452047 ARHGAP8P85298 464 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 GOLGA8FQ08AF8 430 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 GOLGA8DPQ0D2H9 430 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 CRY1Q16526 586 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 CSRP2Q16527 193 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-208ENST00000452047 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 Q6ZNB5 142 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 ALLCQ8N6M5 410 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 NAT16Q8N8M0 369 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 NELFBQ8WX92 580 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 LOXL4Q96JB6 756 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 MARK1Q9P0L2 795 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 TSPAN16Q9UKR8 245 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
CPSF4-208ENST00000452047 SGK1O00141 431 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 TULP2O00295 520 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 BIN1O00499 593 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
CPSF4-208ENST00000452047 CACNG3O60359 315 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 ADAM23O75077 832 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 STC2O76061 302 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 EPN2O95208 641 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 TBXAS1P24557 533 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-208ENST00000452047 TIE1P35590 1138 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 BCAT1P54687 386 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
CPSF4-208ENST00000452047 LRMPQ12912 555 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 ANO4Q32M45 955 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 PLK5Q496M5 336 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 EMC10Q5UCC4 262 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 PM20D1Q6GTS8 502 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 DGLUCYQ7Z3D6 616 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
CPSF4-208ENST00000452047 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
CPSF4-208ENST00000452047 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms