RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CYP11A1P05108 521 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 MCF2P10911 925 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 XRCC6P12956 609 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CYP3A5P20815 502 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 OXTRP30559 389 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 SOX11P35716 441 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 TNFSF9P41273 254 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CSNK1EP49674 416 aaKnown RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 INHBCP55103 352 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 C10orf76Q5T2E6 689 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 KIAA1324Q6UXG2 1013 aaKnown RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 MAEAQ7L5Y9 396 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 TAS1R3Q7RTX0 852 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 FILIP1Q7Z7B0 1213 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CHD1LQ86WJ1 897 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CHPFQ8IZ52 775 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 ADGRG2Q8IZP9 1017 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 ARL14EPQ8N8R7 260 aaPredicted RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 EXD3Q8N9H8 876 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 TERB1Q8NA31 727 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 C1orf216Q8TAB5 229 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 POM121Q96HA1 1249 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 SLC22A12Q96S37 553 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 NAP1L4Q99733 375 aaKnown RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 GABRG3Q99928 467 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 HSD17B14Q9BPX1 270 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 RNF26Q9BY78 433 aaPredicted RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 CD93Q9NPY3 652 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 THSD1Q9NS62 852 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 ABI2Q9NYB9 513 aaPredicted RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 GCNT4Q9P109 453 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 EIF2B4Q9UI10 523 aaKnown RBP8.47□□□□□ -1.05
LINC01961-201ENST00000449954 DSEQ9UL01 958 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 PCDHA4Q9UN74 947 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 ANKRD6Q9Y2G4 727 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 STARD13Q9Y3M8 1113 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 PHLPP2Q6ZVD8 1323 aa8.47□□□□□ -1.05
LINC01961-201ENST00000449954 BTBD18B2RXH4 712 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 XPOTO43592 962 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 NOL4O94818 638 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 STAU1O95793 577 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 HDCP19113 662 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 CHMLP26374 656 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 RPL10AP62906 217 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 NFKB2Q00653 900 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 DNAJC3Q13217 504 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 ORC1Q13415 861 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 DBN1Q16643 649 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 ZC2HC1CQ53FD0 456 aaPredicted RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 BTBD8Q5XKL5 378 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 TMEM214Q6NUQ4 689 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 FOXR1Q6PIV2 292 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 TRIM22Q8IYM9 498 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 PLPP7Q8NBV4 271 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 PIGOQ8TEQ8 1089 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 BSNDQ8WZ55 320 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 HAS1Q92839 578 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 IFT74Q96LB3 600 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 MMS19Q96T76 1030 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 SEMA3CQ99985 751 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 MRPL4Q9BYD3 311 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 RPF1Q9H9Y2 349 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 PTPRHQ9HD43 1115 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 DEC1Q9P2X7 70 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 ADAMTS1Q9UHI8 967 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 UBQLN1Q9UMX0 589 aaKnown RBP8.46□□□□□ -1.06
LINC01961-201ENST00000449954 PCDHB6Q9Y5E3 794 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 CENPEQ02224 2701 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 TMEM131Q92545 1883 aa8.46□□□□□ -1.06
LINC01961-201ENST00000449954 ZFHX3Q15911 3703 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 BLACEA4D250 179 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 C2orf78A6NCI8 922 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 H0Y8X5 98 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 K7ERI5 159 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 M0R2N6 131 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 LEFTY2O00292 366 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 GFRA2O00451 464 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 SLC27A2O14975 620 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 YKT6O15498 198 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 BAG4O95429 457 aaKnown RBP8.45□□□□□ -1.06
LINC01961-201ENST00000449954 ITGB2P05107 769 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 WASP42768 502 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 ASIC1P78348 528 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 ATP2C1P98194 919 aaPredicted RBP8.45□□□□□ -1.06
LINC01961-201ENST00000449954 GAD2Q05329 585 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 GALNT17Q6IS24 598 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 RHBDF2Q6PJF5 856 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 CCDC81Q6ZN84 652 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 NEK8Q86SG6 692 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 DDX42Q86XP3 938 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC01961-201ENST00000449954 DCP1BQ8IZD4 617 aaKnown RBP8.45□□□□□ -1.06
LINC01961-201ENST00000449954 BLIDQ8IZY5 108 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 FAM177A1Q8N128 213 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms